| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1354 |
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| Symbol | |
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| ID | 5711905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1406021 |
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| End bp | 1407271 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641267266 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001532697 |
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| Protein GI | 159043903 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.27612 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACA CACCCACGCC CACGCCGCCC ACCGGGCGCG GCGCTCTGCA TCGGCGCGAG
GCGCGGCTGG CCTGGGGCTT GCTGCTGCCC ACTGTGATCA GCGTGTCGCT GGTGGTGATC
CTGCCGCTGC TGGCGATTTT CTGGATCAGC TTCAAGCCTG TGGGGTTGGC GGACCTGCGC
CCCACGGCGC CCGTGGTGCG CGAGAGCCTG CGCGGCTCGG GCGAGGACCT GCGGATCGAG
TACCGGCTGC GCAACTCGTC TCAGGACAAG GAGATCCGCG GCGTCACCCT GACCGACACC
CTGCCGGACA CGGTCGTGGT GGGCGAGGGG CTGCCGGAGT TCTGCACCCT CTCGGGGCGG
GCTTTGCGCT GCGACTACGG CGATATCTCG GGCGGGTTCA ACGAACGCTT CGCCCTGCCG
ATCACGCTCG CCCCCGGGGC GGATGAAGAC GCGGTGGAGG ATGTCGTCGA GGGCAGCCTG
CCCAGGATCA CCGGCGAAGG CGATAGCATC CTGACCAATG CCGAGTTCAC CCTGGAGAAT
TTCGCGCGCA TCTTCGACGC CGACGAGTTC TGGGGCGTGC TCGGGGTGAC GATGTTCTAC
ACGGTGTTCG GCACGCTCGG CGCACTTCTG TTCGGGCTTT TCGCGGCGCT TTTGCTGAAC
AAGTCGTTCC GGGGGCAGGG GATCCTGCGG GGGCTGTACC TGTTCCCCTA TGTCGCGCCG
GTCATCGCGG TGGCCTTCAC CTGGGTGACC CTGTTCGATC CGTTCTCGGG CTCGGCCAAT
GCGCTGCTGA TCCAGATGGG GGTGACCAAC GAGGCGATCA ATTTCTTCGG CCAGCGCCCG
CTTGCGCTGA TCATGGTGAC GGTGTTCGAG ATCTGGCGGT ACTTCCCGCT GTCCTTTCTG
TTCATTTTGG CCCGGATGCA GAGCATCGAC ACCGATATGT ACGAGGCCGC GGACATGGAC
GGTGCCTCGC CGTTCCAGAA GTTCTGGTAT CTCAGCCTGC CGATGCTGGT GGGGATCCTG
TCGGTGCTGT TCCTGCTGCG CTTCATCTGG ACCTTCAACA AGTTCGACGA CATCTTCCTG
CTGACGGGCG GGAATGCGGG GACACGGACG CTGACGGTGA ATGTTTACGA GCAGGCCTTC
GCGGTCAGCA ATATCGGCGC GGGGGCGGCG GTGGCCGTGG TGATCTTCGG CTGTCTGCTG
CTGTTCTCGG TGCTGTTTTT CCGCTTCATC AGCCGAGAGG AAGGGTTGTG A
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| Protein sequence | MTDTPTPTPP TGRGALHRRE ARLAWGLLLP TVISVSLVVI LPLLAIFWIS FKPVGLADLR
PTAPVVRESL RGSGEDLRIE YRLRNSSQDK EIRGVTLTDT LPDTVVVGEG LPEFCTLSGR
ALRCDYGDIS GGFNERFALP ITLAPGADED AVEDVVEGSL PRITGEGDSI LTNAEFTLEN
FARIFDADEF WGVLGVTMFY TVFGTLGALL FGLFAALLLN KSFRGQGILR GLYLFPYVAP
VIAVAFTWVT LFDPFSGSAN ALLIQMGVTN EAINFFGQRP LALIMVTVFE IWRYFPLSFL
FILARMQSID TDMYEAADMD GASPFQKFWY LSLPMLVGIL SVLFLLRFIW TFNKFDDIFL
LTGGNAGTRT LTVNVYEQAF AVSNIGAGAA VAVVIFGCLL LFSVLFFRFI SREEGL
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