| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1349 |
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| Symbol | |
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| ID | 5711915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1400718 |
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| End bp | 1402574 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641267261 |
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| Product | ABC transporter related |
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| Protein accession | YP_001532692 |
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| Protein GI | 159043898 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.238944 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTACGCA TCGATGACAT CTCCTATTCG GTCGAGGGGC GCCCGCTGCT CGAACATGCC
TCCGCGGTGA TCCCCAGTGG TCACAAGGTC GGCCTGGTGG GGCGCAACGG GACCGGCAAG
ACCACGCTTT TCCGGCTGAT CCGGGGCGAG CTGACGCTCG ATACGGGCGA GATCACCCTG
CCCCGCGGCG CGCGGATCGG CGGGGTCAGC CAGGAGGTGC CGGGCAACGA GGTGTCGCTG
CTGAACACGG TGCTGGCCGC CGACACCGAA CGCGCGGGCC TGATGGCGGA GGCCGAGACC
GCCACCGACC CGGGCCGGAT CGCCGAGATC CAGACGCGGC TCGCGGATAT CGACGCCTGG
TCGGCCGAGG CGCGCGCGTC GTCCATCCTG CGCGGTCTGG GCTTCACCGA GCCCGAGACG
CACCAGCCGT GCTCGGCCTT CTCGGGCGGC TGGCGGATGC GGGTGGCGCT GGCGGCGGTG
CTGTTCTCGC AACCCGACCT GCTGCTGCTG GACGAGCCGA CCAACTATCT CGACCTCGAA
GGGGCGCTCT GGCTGGAGGC GTATCTCGCC CGCTATCCGC ACACGGTGCT GATCGTCTCC
CACGACCGGG GGCTGCTGAA CCGCGCCGTG GGCGGGATCC TGCATCTCGA GGACCGCAAG
CTCACCTTCT ATACCGGCCC CTATGACCAG TTCGCCCGCC AGCGCGCCGA GAAACGCGCG
CTGCAAGCCG CCGCGGCGCG CAAACAGGAC GCCAAGCGCG CCCATCTCGA GAGCTTCGTG
AACCGGTTCA AGGCCAAGGC GTCGAAGGCC AAGCAGGCCC AGAGCCGGGT CAAGATGCTG
GAAAAGATGG AGACGATCCG CGTCCCCGAG GATGCCGCGC GCACGGTCTT CACCTTCCCC
ACCCCCGAGG AACTCAGCCC ACCCATCGTG GCGACCGAGG GGGCCTCGGT CGGCTACGAC
GGGACGGCCG TTTTGCGCGG GCTGTCCCTG CGGATCGACC AGGACGACCG GATCGCGCTG
CTGGGCCGCA ATGGCGAGGG CAAGTCGACC CTGTCCAAGC TGCTCGCCGG GCGGCTGGAG
GCGATGGACG GCACGCTGAC CGCGTCGAAC AAGCTGCGCA TCGGGTTCTT CGCCCAGCAC
CAGGTGGACG AGTTGCGGGT CGAGGAAACC CCGCTGCAGC ACCTGCTGCG CGTGCGTCCC
GATGAAGGCC AGGCCAGGCT GCGCGCGCGG CTGGCGGGCT TCGGGCTGAT GGCCGCACAA
GCCGAGACCG AGGTCGGACG CCTGTCGGGC GGGCAGAAGG CGCGGCTGTC ACTGCTGCTG
GCGACGCTGG ACGCGCCGCA TCTGCTGATC CTGGACGAGC CGACGAACCA CCTGGATATC
GAAAGCCGTG AGGCGCTGGT CGAGGCCCTG ACCGCCTATA CGGGGGCTGT GATCCTGGTG
AGCCACGACA TGCACCTGCT GAGCCTGGTG GCCGACCGGC TGTGGCTGGT CAAGGACGGC
CATGTGGCGC CTTACGAGGA TGATCTCGAG GCCTACCGCC AGATGCTGCT GACGCCCGAC
AAGCCGCGCA AGCCCAAGGC CGCCCCCGAG ACCGCGCCCA AACGCCCCTC GCGCGATGCG
ATCCTGGCCC TGCGCGCCGA GGCCCGCAAA TGCGAGGAAC GGGTGAAGAA GATCACCGAG
ATGCAGGAAA AGCTGTCGAA AAAGCTCGCC GACCCCGCGC TTTACGAGGA CGCCAAGGCG
GGTGAGCTGG AAACCTGGAA CCGCAAATAT GCCGAGGTGA TGGACGGGCT CGACCGGGCG
GAGGCGATGT GGATGGCCGC GCTCGAGAAG CTGGAGAAGG CCGAAAAGGC CGCCTGA
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| Protein sequence | MLRIDDISYS VEGRPLLEHA SAVIPSGHKV GLVGRNGTGK TTLFRLIRGE LTLDTGEITL
PRGARIGGVS QEVPGNEVSL LNTVLAADTE RAGLMAEAET ATDPGRIAEI QTRLADIDAW
SAEARASSIL RGLGFTEPET HQPCSAFSGG WRMRVALAAV LFSQPDLLLL DEPTNYLDLE
GALWLEAYLA RYPHTVLIVS HDRGLLNRAV GGILHLEDRK LTFYTGPYDQ FARQRAEKRA
LQAAAARKQD AKRAHLESFV NRFKAKASKA KQAQSRVKML EKMETIRVPE DAARTVFTFP
TPEELSPPIV ATEGASVGYD GTAVLRGLSL RIDQDDRIAL LGRNGEGKST LSKLLAGRLE
AMDGTLTASN KLRIGFFAQH QVDELRVEET PLQHLLRVRP DEGQARLRAR LAGFGLMAAQ
AETEVGRLSG GQKARLSLLL ATLDAPHLLI LDEPTNHLDI ESREALVEAL TAYTGAVILV
SHDMHLLSLV ADRLWLVKDG HVAPYEDDLE AYRQMLLTPD KPRKPKAAPE TAPKRPSRDA
ILALRAEARK CEERVKKITE MQEKLSKKLA DPALYEDAKA GELETWNRKY AEVMDGLDRA
EAMWMAALEK LEKAEKAA
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