| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1347 |
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| Symbol | |
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| ID | 5711913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1399416 |
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| End bp | 1400000 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641267259 |
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| Product | hypothetical protein |
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| Protein accession | YP_001532690 |
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| Protein GI | 159043896 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3577] Predicted aspartyl protease |
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| TIGRFAM ID | [TIGR02281] clan AA aspartic protease, TIGR02281 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.156932 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGAGA TATCCGTCCC CAACCTGATC TACCTGATTT TGCTGCTTCT GTTCATCGGC
GGCGGCACCC TGATGGCATT TCGTGGCCAG CTGGGCGCTT TGGTGCGCAC GGCGACGTCC
TGGGCGCTGC TGTTTGCGCT GGTGGTGATC GGTTACGGCG TGTTCAGCGA CCAGCGCTCG
CCCCTGCCCC GGCAGTCGGT CTTTGCCGAA ACCGGCCGGG TGGAAATCCC CCGCGCCATG
GACGGGCATT ACCACGTGGT CCTGGACGTG AACGGCGCGC CTATCGAATT CATCGTGGAT
ACCGGCGCGA GCGACATGGT GCTGAGCCTG CAGGACGCCG CACGGGCCGG GATCAACCCG
GAAAACCTGA TGTTTTCGGG GCTGGCCATG ACCGCGAACG GGCGGGTGGA AACCGCGCCG
GTGCGCTTGA AGGAAGTGCG CCTGGGTGGG ATTTCGGACG AGAACGTGCG CGCGGTGGTC
AATGGCGGAG AGATGCACCG GTCCCTTCTG GGGATGAGCT ATCTCAACAG CTTCGACCGG
ATCGAGATCA ACGAAGGCCG CCTGATCCTC GAACGGGGCG TCTGA
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| Protein sequence | MSEISVPNLI YLILLLLFIG GGTLMAFRGQ LGALVRTATS WALLFALVVI GYGVFSDQRS
PLPRQSVFAE TGRVEIPRAM DGHYHVVLDV NGAPIEFIVD TGASDMVLSL QDAARAGINP
ENLMFSGLAM TANGRVETAP VRLKEVRLGG ISDENVRAVV NGGEMHRSLL GMSYLNSFDR
IEINEGRLIL ERGV
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