Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1346 |
Symbol | |
ID | 5711912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 1398467 |
End bp | 1399318 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641267258 |
Product | protein of unknown function DUF815 |
Protein accession | YP_001532689 |
Protein GI | 159043895 |
COG category | [R] General function prediction only |
COG ID | [COG2607] Predicted ATPase (AAA+ superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.225611 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACCGAAG ACGTGATGGT ACGGATCGCC GAGGCGCTGG AGCGTCTCGC GCCGCCGCCC TTGGCCGCCC CGGATTTCAC CCGCGCCGAC GCCTTCCTGT GGCAAGAACG GCCCGAGGCG GTGCTGCCGG TGCGCGACGT CAACCGGATC GACATCGCCC TGCTGGTGGG CATTACCCGG GCGCGCGACA CCTTGCTGGA GAACACCCTG CAGTTCGCCC GCGGTCTGCC CGCGAACAAC GCGCTCCTCT GGGGCGCGCG GGGGATGGGG AAATCGTCGC TGGTCAAGGC GGTCCATGCC GAAGTGCTAC GCCAGGGGCA CGAGTTGAAG CTGGTGGAGG TGCCGCGCGA GGATCTCGCC AGCATCGGGC GGCTGCTCGA CCATCTGCGC GCCGCGCCCG GCCATCGCTT CGTGCTCTAT TGCGACGATC TGAGCTTTTC CCATGACGAC CAGCACTACA AATCGCTCAA GGCGGTGCTG GATGGCGGCA TCGCCGGGCG GCCGGACAAC GTGGTGTTCT ACGCCACCTC GAACCGCCGC CACCTGATGC CCCGCGACAT GATCGAGAAC GAGCGATCGT CCGCGATCAA CCCCTCCGAG GCGGTGGAGG AAAAGGTGTC GCTCTCGGAC CGGTTCGGGC TCTGGCTGGG CTTTCATGCC TGTGGGCAGG ACGAGTATCT CGCGATGATC GACGGCTACT GCGCGGCCTA CGGGCTGCAG GTCGCGCCCG AGGTGCTGCG CGCCGAGGCG ATCGAGTGGC AGGCGACCCG TGGCGGGCGC TCGGGCCGGG TCGCGTGGCA GTTCTTCACC GATCTCGCCG GGCGGCATGG CGTGACGCTC AACGCGCCGT AA
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Protein sequence | MTEDVMVRIA EALERLAPPP LAAPDFTRAD AFLWQERPEA VLPVRDVNRI DIALLVGITR ARDTLLENTL QFARGLPANN ALLWGARGMG KSSLVKAVHA EVLRQGHELK LVEVPREDLA SIGRLLDHLR AAPGHRFVLY CDDLSFSHDD QHYKSLKAVL DGGIAGRPDN VVFYATSNRR HLMPRDMIEN ERSSAINPSE AVEEKVSLSD RFGLWLGFHA CGQDEYLAMI DGYCAAYGLQ VAPEVLRAEA IEWQATRGGR SGRVAWQFFT DLAGRHGVTL NAP
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