| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1342 |
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| Symbol | |
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| ID | 5711900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1395858 |
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| End bp | 1396517 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641267254 |
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| Product | helix-turn-helix type 11 domain protein |
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| Protein accession | YP_001532685 |
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| Protein GI | 159043891 |
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| COG category | [K] Transcription |
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| COG ID | [COG2378] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.160191 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGTC CAGAACGTCT CAAGGCGCTG ATCCAGTCCC TGGGCACCGG CCCCGCGCGC
ACGGCGGCGG AGTTGGCGGC GCGGTTCGGC GTGACCGAGC GGACGATCTA CCGCGACATG
GACCGGCTGC GGGCCGAGGG GGTGCCGCTG GCGGGCACGC CGGGCCAGGG CTACCGGCTG
ACGGCGGCGT TCGCCCTGCC GCCGCTGGCC CTGTCGGCGC GGGAGTTGGA AGCGCTGCAC
CTGGGGTTGT CGATTGTCGG CGAAGCGGGG GATGCGGGGC TGGCGGCGGC GGCGGCCTCC
CTGTCGGCGC GGATCGACGG GGCGCTGTCG GAGGATGCGG GCACCGCCGG GGCGCGCTGG
GGCTTCACGC CGACGCCCAC GGGGACGGCG GCGGAATACC TGCGCTTCCT GCCGACCCTG
CGGGCGGCGT TGCGGGCCCG CCAGAAGATC GCCCTGCGCC TGCGCGACGG GTCCGAGCAC
CAGATGCGGC TGCTGGCGCT GGAGTATCAC GGGCGGCTGT GGATCTGCGG CGGCTGGTGC
GAGGGGTGCG GGGCGTTCCA CCGGGTGCGG CTGGACGAGA TCAGAGATCA CCGGCTCCTG
TCGGCGCTGT TCGTGGACGA GCCCGGGCGG GATCTGGCGG CTTACCACGC GGCGGTCTGA
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| Protein sequence | MSRPERLKAL IQSLGTGPAR TAAELAARFG VTERTIYRDM DRLRAEGVPL AGTPGQGYRL
TAAFALPPLA LSARELEALH LGLSIVGEAG DAGLAAAAAS LSARIDGALS EDAGTAGARW
GFTPTPTGTA AEYLRFLPTL RAALRARQKI ALRLRDGSEH QMRLLALEYH GRLWICGGWC
EGCGAFHRVR LDEIRDHRLL SALFVDEPGR DLAAYHAAV
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