| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1341 |
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| Symbol | |
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| ID | 5711899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1394766 |
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| End bp | 1395854 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641267253 |
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| Product | ABC transporter related |
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| Protein accession | YP_001532684 |
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| Protein GI | 159043890 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.068199 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAACATC AACCGATTCC CCGGCTGGAA GTCTCCCACC TGGTGCGGGA TTTCCAGGGG
CAGCGCGTGG TGGACGATGT CTCGATCCGG GTGATGCCGG GGCAGGTCAC CTGCCTTCTG
GGGCCCTCGG GCTGCGGCAA ATCCACCACC CTGCGGATCA TCGCGGGCGT GGACCGGCAG
GACTCCGGAA CGCTCACCGT CGATGGCGAG GTCGTGTCCT CCGACGACAT CCACCTGCCG
CCCGAGGCCC GCTCCGTCGG GCTGATGTTT CAGGATTTCG CGCTCTTTCC CCATCTCTGC
GTCGCTGACA ACGTGGGCTT CGGCCTCTCC GGCAGCCGCA AGGAGAAACG CGCGCGCGCC
CATGAGCTGC TCGACCGCGT GGGCCTTCTG GGCGACGCCG GGAAATTCCC CCACCAGCTG
TCGGGCGGGG AGCAGCAGCG CGTGGCCCTG GCCCGCGCCA TCGCCCCGCG CCCGCGCGTG
ATGCTGATGG ACGAGCCTTT CTCGGGCCTC GACAACCGCC TGCGCGACGG CATCCGCGAC
GAGACGCTCG AAGTGCTCAA GGACGAGGGC ACCGCCGTCC TGCTCGTGAC CCACGAGCCC
GAGGAGGCCA TGCGCATGGC CGACAACATC GCGCTGATGC GCGGCGGCAA GATCGTCCAG
CAGGGCGCGC CCTACAACGT CTACAACTCC CCCGTGGACA AGGCGGCGGC GGCGTTTTTC
AGCGATATCA ACGTGATCGA GAGCACCGTG CAGGGTGCGC TCACCGAAAC CCCCTTCGGC
CAGTTCCTCG CCCCCGGCGT GCCCAATGGC GGCCGGGTCG AGATCGTCAT CCGGCCCCAG
CACCTGCGCA TCGATTTCGA CCGGAACGGG CAGGGGCCGC TGCCCACCCC CCAGGACGGC
ACGCCCGCGC GCGGTACGGT GCAGCGCGCG CGCTTCATGG GCGCCGAAAG CCTCGTGGAA
TTCCGCATGG ATTTCGACGA CGTGATCCTG CGCGCCAAGG TTCCCGGCGT CTTCATGCCC
AAACCGGGCA CCGTGCTGTG GCTGTCCATG CGGCGCGACC GCTGTTTCGT CTTCCCCGCC
CGCGACTGA
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| Protein sequence | MKHQPIPRLE VSHLVRDFQG QRVVDDVSIR VMPGQVTCLL GPSGCGKSTT LRIIAGVDRQ
DSGTLTVDGE VVSSDDIHLP PEARSVGLMF QDFALFPHLC VADNVGFGLS GSRKEKRARA
HELLDRVGLL GDAGKFPHQL SGGEQQRVAL ARAIAPRPRV MLMDEPFSGL DNRLRDGIRD
ETLEVLKDEG TAVLLVTHEP EEAMRMADNI ALMRGGKIVQ QGAPYNVYNS PVDKAAAAFF
SDINVIESTV QGALTETPFG QFLAPGVPNG GRVEIVIRPQ HLRIDFDRNG QGPLPTPQDG
TPARGTVQRA RFMGAESLVE FRMDFDDVIL RAKVPGVFMP KPGTVLWLSM RRDRCFVFPA
RD
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