| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1336 |
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| Symbol | prfC |
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| ID | 5711894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1389301 |
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| End bp | 1390908 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641267248 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_001532679 |
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| Protein GI | 159043885 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0751595 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGACC GCACCCATAA CGCCCCCGAC CTGCCGCCCG AGATCGCGCG GCGCCGCACC
TTCGCGATCA TCTCGCACCC GGATGCGGGC AAGACGACCC TGACGGAGAA GTTCCTGCTC
TATGGCGGGG CGATCCAGAT GGCGGGACAG GTGCGCGCCA AGGGCGAGGC GCGGCGCACG
CGCTCGGACT TCCTGGCGAT GGAGAAGGAC CGGGGGATTT CCGTGTCGGC CTCGGCCATG
TCGTTCGATT ACAAGGACTA CCGGTTCAAC CTGGTGGACA CGCCCGGCCA CTCGGATTTC
TCCGAAGACA CCTACCGGAC GCTGACGGCG GTGGATGCGG CGGTGATGGT GATCGACGGT
GCCAAGGGGG TGGAGAGCCA GACGCAGAAG CTGTTCGAGG TGTGCCGGTT GCGCGACCTG
CCGATCCTGA CCTTCTGCAA CAAGATGGAC CGCGAGAGCC GCGACACGTT CGACATCATC
GACGAGATCC AGGAGAACCT GGCGATCGAC GTCACCCCCG CAAGCTGGCC CATCGGGGTC
GGGCGCGATT TTCTGGGGTG TTACGACCTG ATCCATGACC GGCTGGAGCT GATGGACCGC
GCCGACCGGA ACAAGGTCGC CGAAAGCATC GAGATCAACG GTCTGGACGA TCCGAAACTG
GCCGAGCATG TGCCCGCGCA TCTGCTGGAA AAGCTGCTCG AAGAGGTGGA GATGGCGCGC
GAGCTCTTGC CGCCGCTGGA CCAGCAGGCC TTGCGCGACG GGACGCTGAC GCCGATCTGG
TTCGGCTCGG CGATCAATTC CTTCGGGGTC AAGGAGTTGA TGGACGGGAT CGGGGAATAC
GGGCCCGAGC CGCAGGTGCA GCCGGCCGAG CCGCGGCAGG TGTCCCCCGA CGAGAAGGCG
GTGACGGGCT TCGTGTTCAA GGTGCAGGCC AACATGGACC CCAAGCACCG GGATCGGGTG
GCCTTCGTGC GCATGGTGTC GGGGCATTTC AAGCGCGGCA TGAAGCTGAC CCATGTGCGG
TCGAAAAAGG CGATGTCGAT CACCAACCCG GTGCTGTTTC TCGCCTCGGA CCGGGAGTTG
GCCGAAGAGG CCTGGGCGGG CGACATCATC GGCATTCCGA ACCACGGGCA GCTGCGGATC
GGCGATGCGC TGACCGAGGG CGAGTCGATC CGGATCAGCG GCATCCCGTC CTTTGCGCCG
GAGTTGTTGC AGAGCGCGCG GGCGGGCGAC CCGATGAAGG CAAAGCACCT CGAAAAGGCG
CTGATGCAGT TCGCCGAGGA AGGCGCGGCG AAGGTGTTCA AGCCCGCCAT CGGCTCGGGG
TTCATCGTGG GCGTGGTGGG TCAGTTGCAG TTCGAGGTGC TGGCCAGCCG GATCGAGCTG
GAATACGGCC TGCCGGTGCG GTTCGAGCCG TCGCAATTCA CCTCCGCGCG CTGGATCACC
GGCGAAAAGA TCGCGCTGGA CAAGCTGGAG GCGTCGAACA AGCAGCACAT CGCCCATGAC
CACGACGGCG ACCCGGTCTT CCTGACGCGG CTGCAATGGG ACATCGACCG GGTGGAGCGG
GATTATCCGG ACCTGAGCCT GACCGCGACG AAGGAAATGA TGGTGTGA
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| Protein sequence | MLDRTHNAPD LPPEIARRRT FAIISHPDAG KTTLTEKFLL YGGAIQMAGQ VRAKGEARRT
RSDFLAMEKD RGISVSASAM SFDYKDYRFN LVDTPGHSDF SEDTYRTLTA VDAAVMVIDG
AKGVESQTQK LFEVCRLRDL PILTFCNKMD RESRDTFDII DEIQENLAID VTPASWPIGV
GRDFLGCYDL IHDRLELMDR ADRNKVAESI EINGLDDPKL AEHVPAHLLE KLLEEVEMAR
ELLPPLDQQA LRDGTLTPIW FGSAINSFGV KELMDGIGEY GPEPQVQPAE PRQVSPDEKA
VTGFVFKVQA NMDPKHRDRV AFVRMVSGHF KRGMKLTHVR SKKAMSITNP VLFLASDREL
AEEAWAGDII GIPNHGQLRI GDALTEGESI RISGIPSFAP ELLQSARAGD PMKAKHLEKA
LMQFAEEGAA KVFKPAIGSG FIVGVVGQLQ FEVLASRIEL EYGLPVRFEP SQFTSARWIT
GEKIALDKLE ASNKQHIAHD HDGDPVFLTR LQWDIDRVER DYPDLSLTAT KEMMV
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