| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1335 |
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| Symbol | |
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| ID | 5711893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1388539 |
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| End bp | 1389207 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641267247 |
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| Product | hypothetical protein |
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| Protein accession | YP_001532678 |
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| Protein GI | 284928594 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02595] PEP-CTERM putative exosortase interaction domain
[TIGR03370] variant PEP-CTERM putative exosortase signal, Roseobacter type |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.128614 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0757331 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCGGAAA ACGTCGAGTG GCGCGATGGC TCCACCCGCT TCGTCTTCAT GTTCGGCGAT
GCAGGCTTCA AGACCAGCGA TGCGGGCGAA GTCGATTTCG GAATGGACTT CGACGATTTC
GACAATTTTG ATGGCAACCC GATCTCGACC GTTGCCGACG CGGTGAGCGC GCTGGACGCC
GAAGGCATCG AGCTTTTCGG TCTGTCCTAT AGCAGCAGCT TCACCGCGGC CATCGAGGCC
CTCGGCGGCG AAGCCTTCGC AAGCACGCTC GACCCGGCCG ACATCGTGGA CGACATCACG
TCCGGGATCA TTGCGGGCTT CTCCGAGTAC GGCACGGTGA CCGTCGATGA TCTGGGCGGT
GGCGATCCGC TGATCTCTGT CAGCACCGTC TGTGTGTCCG CAGATAGCGG CGCGTGCGTC
GGGTCCGACG CCGTTGGTAT GTTCGACCGT TCGGTCGAGC GCTCCTTCGA ATTCGACGTG
ACCTTCACCC GCGATGCCGA AGGCCTTGCC GAGTTCGAAA CCTTCGCTCT GGTCGACGGT
GGCATTGTGG CAACGGAGAA GGACACCTTC ACCGAGCCGA GCGCGATTCC GCTGCCTGCC
GGTGCATGGC TGATGCTGGC CGGTCTGGGT GGCCTTGCCG CCACGCGCCG CCGCAAGAAA
GCTGCCTGA
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| Protein sequence | MAENVEWRDG STRFVFMFGD AGFKTSDAGE VDFGMDFDDF DNFDGNPIST VADAVSALDA
EGIELFGLSY SSSFTAAIEA LGGEAFASTL DPADIVDDIT SGIIAGFSEY GTVTVDDLGG
GDPLISVSTV CVSADSGACV GSDAVGMFDR SVERSFEFDV TFTRDAEGLA EFETFALVDG
GIVATEKDTF TEPSAIPLPA GAWLMLAGLG GLAATRRRKK AA
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