Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1319 |
Symbol | |
ID | 5711877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 1369561 |
End bp | 1370079 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641267231 |
Product | hypothetical protein |
Protein accession | YP_001532662 |
Protein GI | 159043868 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.314854 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.00847169 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAGCGCGG CGCAGACATA CGCGGCCGCC GGGCATCACC TGGCGCAGCT CAATGTCGGG CGGTTGGTGG CCGAGACGGA CGATCCGCGC GTGGCGGAGT TCATGGAGAA TCTCGACCGC ATCAACGGCC TGGGCAAGCG CATGCCCGGG TTCGTGTGGA TGATGGAAGG CTCTGGCGCG CCGGACACCG GCAACACGGA TGCCAAGATC GAGGGCGATC CGCGCTACGT GTCCAACCTG ACCGTCTGGG AGGACGTGGC GAGCCTGGAG ACCTTCGTCT GGGGCACGAT CCACAAGCAG TTCTATGCGC GTCGCGCCGA GTGGTTCGAG GCCCTTGGCG AGATGCATTT CGTGATGTGG TGGGTCCCCG CGGGCCACCG CCCGAGCCTC GACGAGGCTT TGGCGCGGCT TGCGCATCTC GAGACCCACG GAGACAGCGA CCACGCCTTC GGCTGGTCAT ATCTGAAAGA GGCGCGCCTG TGGAAGGACC ACAGCTGCGC GCCCGTAGCG GCGGAGTAA
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Protein sequence | MSAAQTYAAA GHHLAQLNVG RLVAETDDPR VAEFMENLDR INGLGKRMPG FVWMMEGSGA PDTGNTDAKI EGDPRYVSNL TVWEDVASLE TFVWGTIHKQ FYARRAEWFE ALGEMHFVMW WVPAGHRPSL DEALARLAHL ETHGDSDHAF GWSYLKEARL WKDHSCAPVA AE
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