Gene Dshi_1319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1319 
Symbol 
ID5711877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1369561 
End bp1370079 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content66% 
IMG OID641267231 
Producthypothetical protein 
Protein accessionYP_001532662 
Protein GI159043868 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.314854 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.00847169 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGCGCGG CGCAGACATA CGCGGCCGCC GGGCATCACC TGGCGCAGCT CAATGTCGGG 
CGGTTGGTGG CCGAGACGGA CGATCCGCGC GTGGCGGAGT TCATGGAGAA TCTCGACCGC
ATCAACGGCC TGGGCAAGCG CATGCCCGGG TTCGTGTGGA TGATGGAAGG CTCTGGCGCG
CCGGACACCG GCAACACGGA TGCCAAGATC GAGGGCGATC CGCGCTACGT GTCCAACCTG
ACCGTCTGGG AGGACGTGGC GAGCCTGGAG ACCTTCGTCT GGGGCACGAT CCACAAGCAG
TTCTATGCGC GTCGCGCCGA GTGGTTCGAG GCCCTTGGCG AGATGCATTT CGTGATGTGG
TGGGTCCCCG CGGGCCACCG CCCGAGCCTC GACGAGGCTT TGGCGCGGCT TGCGCATCTC
GAGACCCACG GAGACAGCGA CCACGCCTTC GGCTGGTCAT ATCTGAAAGA GGCGCGCCTG
TGGAAGGACC ACAGCTGCGC GCCCGTAGCG GCGGAGTAA
 
Protein sequence
MSAAQTYAAA GHHLAQLNVG RLVAETDDPR VAEFMENLDR INGLGKRMPG FVWMMEGSGA 
PDTGNTDAKI EGDPRYVSNL TVWEDVASLE TFVWGTIHKQ FYARRAEWFE ALGEMHFVMW
WVPAGHRPSL DEALARLAHL ETHGDSDHAF GWSYLKEARL WKDHSCAPVA AE