| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1316 |
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| Symbol | nuoF |
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| ID | 5711874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1367416 |
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| End bp | 1368717 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641267228 |
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| Product | NADH dehydrogenase I subunit F |
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| Protein accession | YP_001532659 |
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| Protein GI | 159043865 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
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| TIGRFAM ID | [TIGR01959] NADH-quinone oxidoreductase, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.132795 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0201547 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCAAG ATCAGGACCG GATCTTTACC AATATCTACG GGATGCATGA CCGCACTCTG
GCCGGAGCCC GCAAGCGCGG GCACTGGGAC GGGACCGACA AGCTGATCCA GATGGGCCGT
GACGACATCG TCAAGATCAT GAAGGACAGT GGTCTGCGCG GGCGGGGCGG CGCGGGCTTC
CCCACGGGGC TCAAGTGGTC CTTCATGCCC AAGGAAAGCG ACGGGCGGCC CCATTACCTG
GTGGTGAATG CCGACGAATC CGAGCCGGGC ACCTGCAAGG ACCGGGAGAT CATGCGCCAT
GATCCCCACA CGTTGATCGA GGGCTGCCTG ATCGCGTCCT TCGCCATGGG GGCCCATGCC
AGCTACATCT ATATCCGCGG CGAGTATATC CGCGAGCGCG AGGCGCTGCA GGCGGCGATC
GACGAGGCCT ACGAGGCGGG GCTTCTGGGC AAGAACGCCG CCGGCTCCGG CTGGGATTTC
GACCTCTACC TGACCCACGG GGCGGGCGCC TATATCTGCG GCGAGGAAAC CGCTCTGATC
GAGAGCCTGG AGGGCAAGAA GGGCATGCCG CGCATGAAGC CGCCCTTCCC GGCGGGCGCG
GGGCTCTATG GTTGCCCGAC CACGGTCAAC AACGTGGAAT CCATCGCCGT GGTGCCGACG
ATCCTGCGGC GCGGGGCCGA CTGGTTCGCG CAGTTCGGGC GCCCCAACAA CGCGGGCACC
AAGCTCTTCG CGATCTCGGG CCATGTGAAC CAGCCCTGCG TGGTCGAGGA GGCCATGAGC
ATCTCCTTCG AGGAGTTGAT CGACAAGCAT TGCGGCGGCA TTCGCGGCGG GTGGGACAAC
CTCAAGGCGG TGATCCCCGG CGGGTCGTCC GTGCCGTGTG TGCGCGGCGA GAACATGCGC
GACGCGATCA TGGATTTCGA CTACCTGCGG GGCGAGCTGG GCTCCGGCCT CGGCACGGCG
GCGGTGATCG TGATGGATCA GTCCACCGAC ATCATCAAGG CGATCTGGCG GCTCTCGGCC
TTCTACAAGC ACGAAAGCTG CGGCCAGTGC ACGCCCTGCC GCGAAGGCAC CGGCTGGATG
ATGCGGGTGA TGGACCGGCT GGTGCGCGGC GAGGCGGAGG TCGAAGAGAT CGACATGCTG
TTTGACGTCA CCAAGCAGGT CGAGGGCCAC ACGATCTGCG CGCTCGGCGA CGCGGCGGCC
TGGCCGATCC AGGGCCTGAT CCGCAACTTC CGCGACGAGA TCGAGGACCG GATCAAGGCG
CAGAAGACCG GGCGCGTCAC GGCGGCCCTG GCAGCCGAGT GA
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| Protein sequence | MLQDQDRIFT NIYGMHDRTL AGARKRGHWD GTDKLIQMGR DDIVKIMKDS GLRGRGGAGF
PTGLKWSFMP KESDGRPHYL VVNADESEPG TCKDREIMRH DPHTLIEGCL IASFAMGAHA
SYIYIRGEYI REREALQAAI DEAYEAGLLG KNAAGSGWDF DLYLTHGAGA YICGEETALI
ESLEGKKGMP RMKPPFPAGA GLYGCPTTVN NVESIAVVPT ILRRGADWFA QFGRPNNAGT
KLFAISGHVN QPCVVEEAMS ISFEELIDKH CGGIRGGWDN LKAVIPGGSS VPCVRGENMR
DAIMDFDYLR GELGSGLGTA AVIVMDQSTD IIKAIWRLSA FYKHESCGQC TPCREGTGWM
MRVMDRLVRG EAEVEEIDML FDVTKQVEGH TICALGDAAA WPIQGLIRNF RDEIEDRIKA
QKTGRVTAAL AAE
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