| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1313 |
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| Symbol | nuoE |
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| ID | 5711871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1365222 |
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| End bp | 1366430 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641267225 |
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| Product | NADH dehydrogenase subunit E |
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| Protein accession | YP_001532656 |
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| Protein GI | 159043862 |
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| COG category | [C] Energy production and conversion
[S] Function unknown |
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| COG ID | [COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit
[COG3743] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01958] NADH-quinone oxidoreductase, E subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0324148 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.032376 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCGTC GTCTTCACGC CGAACAACCC GCGGATTTCG CGTTCACGCC CGAGAATGAG
GCCTGGGCGC TGACGCAGAT GACCAAGTTT CCCGAGGGGC GACAGGCCAG CGCGATCATT
CCGATCCTGT GGCGCGCGCA GGAACAGGAA GGCTGGCTCA GCAAACCCGC CATCGAATAC
GTCGCGGACA TGCTGGACAT GCCCTATATC CGGGCGCTGG AAGTGGCGAC ATTCTACTTC
ATGTTCCAGC TGCAACCCGT TGGATCCGTG GCGCATATCC AGATTTGCGG CACGACCTCC
TGCATGATCT GCGGGGCGGA GGACCTGGTC GCGGTCTGCA AGGAGAAGAT CGCGCCGCGC
GCCCATCAGC TGAGCGCCGA TGGCAAGTTC TCTTGGGAAG AGGTCGAGTG CCTCGGTTCC
TGTGCCAACG CGCCCATGGC CCAGATCGGC AAGGATTATT ACGAGGACCT GACGGTGGAG
AGCTTCTCGG CTCTGCTGGA CAGGATGGCT GCCGGCGAGG TGCCCGTGCC CGGCCCGCAA
AACGGCCGCT ACACCTCGGA GCCTGCGGGC GGGTTGACAA GCCTGACCGA GTACGAGGCC
GGCAAGGATC CCTATAACGC CTCCGCGCGT CTGGCGGTGG ACCTGGGCGA TACGCTCAAG
CGGATCGACG GCTCCGAAGT GCCGCTGACG GCACCCTGGC TCGGCAAGGA CGCCGCGCTG
CCCAAGCCCG CGAACCGCCA GGACGCCCCG GTGGCAGAAG CCAAATCCGT TGCGGCCGAG
GCCGCGCCCG ACCCGGCGGT CGCGCCCGCA GCGACCCCTG CCGAGGCGCC CAAGGTCACG
CCGACCGCCG TTCTGCCGGG GCAGGCCGAG TTGGCCACGC GCAAGGGCAA CTGGAAGTAC
GGGGCCGCCG CCCCGCAGCA GGGCGCCAAG CCCAAGATGC TGGAGAGTGC CCGCGCGGGC
GGTGCGGACG ATCTCAAGAA GATCAAGGGC GTGGGCCCCA AGCTCGAGAC CTTGCTGAAC
AGCATGGGGA TTTATCATTT CGACCAGATC GCGGCCTGGT CCGACGCTGA ACTCGCCTGG
GTCGACGAGA ACCTCGAGGG GTTCAAGGGA CGGGCGTCGC GGGACGAGTG GGTCGCACAG
GCGAAAACCC TTGCGTCGGG AGGAGAGACA GAATTTTCTT CCCGCGTTAC AAAGGGTGAC
GTTTACTGA
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| Protein sequence | MLRRLHAEQP ADFAFTPENE AWALTQMTKF PEGRQASAII PILWRAQEQE GWLSKPAIEY
VADMLDMPYI RALEVATFYF MFQLQPVGSV AHIQICGTTS CMICGAEDLV AVCKEKIAPR
AHQLSADGKF SWEEVECLGS CANAPMAQIG KDYYEDLTVE SFSALLDRMA AGEVPVPGPQ
NGRYTSEPAG GLTSLTEYEA GKDPYNASAR LAVDLGDTLK RIDGSEVPLT APWLGKDAAL
PKPANRQDAP VAEAKSVAAE AAPDPAVAPA ATPAEAPKVT PTAVLPGQAE LATRKGNWKY
GAAAPQQGAK PKMLESARAG GADDLKKIKG VGPKLETLLN SMGIYHFDQI AAWSDAELAW
VDENLEGFKG RASRDEWVAQ AKTLASGGET EFSSRVTKGD VY
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