Gene Dshi_1304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1304 
SymbolmvaA 
ID5711862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1358832 
End bp1359620 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content73% 
IMG OID641267216 
Productenoyl-CoA hydratase 
Protein accessionYP_001532647 
Protein GI159043853 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.216289 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0904092 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAGAT TCGAGACACT TGAGGTTGCG CGGGACGGGC GCGGGGTCGT GACGGTCACC 
CTGGCGCGCC CGGACAAGCA CAACGCCATG AATGCCGCGA TGATCGCCGA GTTGCACGGT
CTCGCCCGGA GCCTTGCCGC GGATGCGGCG GTCCGGGTGG TGGTGCTGAC CGGGGCGGGC
CGGAGTTTCT GCGCCGGTGG CGATCTGGGC TGGATGCGCG CGCAGATGGC GGCGGACCCT
GACACCCGGT CGCGGGAGGC GCGCAGCCTG GCGCAGATGC TGGGCGCGTG GAACACGCTG
CCCAAGCCGG TGATCGGGCG TATCCAGGGG CAGGCCTTCG GCGGGGGTGT CGGGCTGATG
GCCGTCTGCG ACGTGGCGGT GGGGGTGCAG GACGCCCGGT TCGGGTTGAC CGAGACGCGG
CTCGGGCTGA TCCCGGCGAC GATCGGGCCC TATGTTGTAG CGCGCATGGG CCAGGCCTGC
GCGCGGCGGG TGTTCATGTC GGCCCGGCTC TTCGATGGGG CCGAGGCGGT CCGGCTGGGC
CTTCTGGCGC GGGCGGTGCC GGAGGCGGAG TTGGACGCCG CCGTGGAGGC CGAGGTGGCG
CCCTATCTCG CGGTGGCGCC GGGGGCGGTG GCGGCGGCCA AGGCGCTGAC GCTGGAGCTG
GGCGGCACGG TCACCGAGGC GCAGATCGAC GCGACCGTGG CGGCGCTGCG CGAAAGGTGG
GAAAGCGACG AGGCGGCCGA GGGGATCGCC GCCTTCTTCG ACAAGCGCAA AGCGCGATGG
GCATCCTGA
 
Protein sequence
MTRFETLEVA RDGRGVVTVT LARPDKHNAM NAAMIAELHG LARSLAADAA VRVVVLTGAG 
RSFCAGGDLG WMRAQMAADP DTRSREARSL AQMLGAWNTL PKPVIGRIQG QAFGGGVGLM
AVCDVAVGVQ DARFGLTETR LGLIPATIGP YVVARMGQAC ARRVFMSARL FDGAEAVRLG
LLARAVPEAE LDAAVEAEVA PYLAVAPGAV AAAKALTLEL GGTVTEAQID ATVAALRERW
ESDEAAEGIA AFFDKRKARW AS