| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1297 |
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| Symbol | ivd |
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| ID | 5711855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1351256 |
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| End bp | 1352419 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641267209 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_001532640 |
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| Protein GI | 159043846 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.329164 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.246274 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCATGG CATCCATGAA GTTCGATCTC GGCGAAGAGG TGGAAGCCCT GCGCGAGATG
GTCCATCGCT GGGCGCAGGA GCGGGTGAAG CCGCTCGCCG CCGAGACCGA CCGGAGCAAT
GCGTTTCCCA ACGCGCTCTG GCCCGAGATG GGGGAGCTGG GCCTGCTGGG CATCACCGTG
GACGAGGCTT ATGGCGGGGC CGGGATGGGA TACCTGGCCC ATACGGTCGC GGTCGAGGAA
ATCTCCCGCG CGTCGGCCTC CATCGGGCTG AGCTATGGCG CGCATTCGAA CCTGTGCGTC
AACCAGATCA AGCTGAACGG CACTGACGCG CAGAAGGAGA AATACCTGCC CAAGCTGGTC
TCGGGCGCCC ATGTGGGGGC GCTGGCCATG TCCGAGGCCG GGGCCGGGTC GGACGTGGTG
GGCATGAAGC TGCGCGCCGA GAAGCGCAAC GATCACTACC GGCTGAACGG CACGAAATAC
TGGATCACCA ACGGGCCGGA TGCCGATACG TTGGTGGTTT ATGCCAAGAC CGACCCGGAG
GCGGGATCGA AGGGAATCAC CGCGTTTCTG ATCGAAAAGG AGATGGCGGG CTTCTCCACC
TCGCCCCATT TCGACAAGCT GGGGATGCGC GGGTCGAACA CCGCGGAGCT GATTTTCGAG
GATGTGGAGG TGCCCTTCGA GAACGTGCTG GGCGAGGAGG GGCGCGGGGT CGCGGTGTTG
ATGTCCGGGC TGGATTACGA GCGCGTGGTG CTGTCGGGGG TCAATATCGG GATCATGGCG
GGCTGTCTCG ACGAGGTCAT GCCGTATATG ACCGAGCGGC GGCAGTTCGG GGAGCCGATC
GGGAATTTCC AGCTGATGCA GGGCAAGATC GCCGACATGT ATACCGCGAT GAACTCGGCG
CGGGCCTATG CCTACGAGGT CGCCAAGGCC TGCGACCGGG GCGAGGTGAC GCGCCAGGAC
GCGGCGGCCT GTGTGCTCTA TGCCTCCGAG GAGGGGATGA AGGTCGCCCA TCAGGCGGTG
CAGGCCATGG GCGGGGCGGG GTTTCTCAAC GACAGCCCCG TGGCGCGGAT GTTCCGGGAC
GCCAAGCTGA TGGAGATCGG CGCGGGCACG TCGGAGATCC GGCGCATGCT GGTCGGGCGC
GAATTGATGG CGGCCATGGC ATGA
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| Protein sequence | MFMASMKFDL GEEVEALREM VHRWAQERVK PLAAETDRSN AFPNALWPEM GELGLLGITV
DEAYGGAGMG YLAHTVAVEE ISRASASIGL SYGAHSNLCV NQIKLNGTDA QKEKYLPKLV
SGAHVGALAM SEAGAGSDVV GMKLRAEKRN DHYRLNGTKY WITNGPDADT LVVYAKTDPE
AGSKGITAFL IEKEMAGFST SPHFDKLGMR GSNTAELIFE DVEVPFENVL GEEGRGVAVL
MSGLDYERVV LSGVNIGIMA GCLDEVMPYM TERRQFGEPI GNFQLMQGKI ADMYTAMNSA
RAYAYEVAKA CDRGEVTRQD AAACVLYASE EGMKVAHQAV QAMGGAGFLN DSPVARMFRD
AKLMEIGAGT SEIRRMLVGR ELMAAMA
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