| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1296 |
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| Symbol | |
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| ID | 5711854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1349879 |
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| End bp | 1351090 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641267208 |
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| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
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| Protein accession | YP_001532639 |
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| Protein GI | 159043845 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.446445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.448884 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACG AGATCTTCCA AGGCAATTTC ACTCAGCAGG AGCCGATCCC GGAGGCCGCC
ATCGCGGCGG CGGTGGCGGT GATGCGCTCG GGCCGGTTGC ACCGTTATAA CCTGGCCCCC
GGCGAGTTGG GCGAGGTCGG CCTGCTGGAA CAGGAGTTCG CCGCGCAGAC CGGGGCGCGG
TATTGCCTGG CCGTGGCTTC GGGCGGCTAT GCCATGGGCA CGGCCCTGCG CGCGCTGGGG
GTGGGCCCGG GCGACAAGGT GCTGACCAAC GCCTTCACCC TGGCCCCGGT GCCGGGGGCG
GTGGCGGCGG TGGGCGCGGT GCCGGTGTTT CTGGAGACGA CCGAGGAGTT GGTGCTTGAT
CTCGACGATC TGGAGGCGAA GGCGGCGGCG GGCGACGCGC GGACCCTGCT GCTGAGCCAT
ATGCGCGGCC ATATCTGCGA CGTGGAGGCG CTCGGCGCGA TCTGCACCCG CCATGGCCTG
ACCCTGATCG AGGATTGCGC GCACACCATG GGGGCGGCCT GGGACGGGAC GCCCACGGGC
CGCTTCGGGG CGTTCGGCTG TTTCTCGACC CAGACCTACA AGCATATCAA TTCCGGCGAG
GGCGGCTTGC TGATCTCCGA CGATGCGGAA CTGATGGCGC GGGCGGTGAT GCTGTCGGGG
AGCTACATGC TCTATGCCCG TCACGGGGCC GCGCCGGATC CGGAGGTGTT CGAGCGGGTG
AAATACGACA CGCCAAATGT CTCGGGCCGG ATGGACCATC TGCGCGCGGC GGTCCTGCGG
CCGCAACTGG CGGACCTGCC GCGGCAGGCG GCGCGCTGGA ATGCGCTTTA CCGGGTGCTG
GAGACCGCCC TGGCAGGGGC CGAGGGCCTC GCACTGCCGC ATCGGCCCGG GAAAGAGCAA
TTCGTCGCCT CGTCCTTCCA GTTCCGCCTG CCCGAGGCGG CCCCGCAGGC GATCGCGGCC
TTCGTGGCGC GCTGTGCCGC GCGCGGGGTG GAGCTTAAAT GGTTCGGCGC GGCGGAGCCG
GTGGGCTTTA CCTCGCGCTA TGACAGCTGG CGCTACGCCC CGGCCCAGAC CCTGCCGCGC
ACGGACCGTG TCCTTGCGAC CCTGCTCGAC CTGCGCCTCC CGCTGACCTT CTCGGAGGCC
GATTGCGCGC AGATCGCGCG GATCCTGGCC GACGAGGCCC GGCGCCTGCC AGGGGCCATG
GCGGCGGAAT GA
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| Protein sequence | MSDEIFQGNF TQQEPIPEAA IAAAVAVMRS GRLHRYNLAP GELGEVGLLE QEFAAQTGAR
YCLAVASGGY AMGTALRALG VGPGDKVLTN AFTLAPVPGA VAAVGAVPVF LETTEELVLD
LDDLEAKAAA GDARTLLLSH MRGHICDVEA LGAICTRHGL TLIEDCAHTM GAAWDGTPTG
RFGAFGCFST QTYKHINSGE GGLLISDDAE LMARAVMLSG SYMLYARHGA APDPEVFERV
KYDTPNVSGR MDHLRAAVLR PQLADLPRQA ARWNALYRVL ETALAGAEGL ALPHRPGKEQ
FVASSFQFRL PEAAPQAIAA FVARCAARGV ELKWFGAAEP VGFTSRYDSW RYAPAQTLPR
TDRVLATLLD LRLPLTFSEA DCAQIARILA DEARRLPGAM AAE
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