| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1293 |
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| Symbol | glmS |
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| ID | 5711851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1345854 |
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| End bp | 1347674 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641267205 |
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| Product | glucosamine--fructose-6-phosphate aminotransferase |
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| Protein accession | YP_001532636 |
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| Protein GI | 159043842 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
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| TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.921081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.297971 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTGGCA TTGTCGGCGT CCTCGGGCAC AACCAGGCGG CCCCCCTGCT GGTGGAGGCG
CTTAAACGGC TCGAATACCG CGGCTATGAC AGCGCCGGTG TCGCCACGGT CCAGGACGGC
CATCTCGACC GCCGCCGCGC CATGGGCAAG CTGGTGAACC TCAGCGACCT GCTGGTGGAA
AACCCGCTCG CGGGCAAGGC CGGCATCGGG CACACCCGCT GGGCCACCCA TGGCGTCCCG
TCGGTCTCCA ACGCCCACCC GCACCAGGCC GGGCCGGTCG CCGTGGTCCA TAACGGCATC
ATCGAGAATT TCCGCGCCCT GCGCGCCGAG CTGATCGCCG ATGGCGCCAA TTTCGAATCC
GAGACCGACA CCGAAACCAT CGCCCAGCTC TGCGCCCGCG AGCTGCGCGC CGGGGCCACC
CCGGTCGAGG CCGCGCGCCG CACCATCGCC CGGCTCGAAG GCGCCTTTGC CCTGTGCTTT
CTGTTCGACG GCCATGACGA CCTGCTGATC GCGGCGCGCA AGGGCTCGCC GCTCGCCATC
GGGCATGGCG ATGGCGAGAT GTTCGTGGGC TCCGACGCGC TGGCGCTCCA CCCCATGACC
GACCGGATCA CCTACCTGGA GGAAGGCGAC TGGGCCGTGG TCACCCGCGC CGGGGTGCAG
GTCTTCGACG CCCGGGACAC CGAGGTGCTG CGCCCCGAAA CCCATGCCCG CATCGACGGC
ACCCAGATCG GCAAGGGCGG CCACCGCCAC TTCATGGCCA AGGAAATCGC CGAGCAACCC
AGCGTGATCT CCGACGTGCT GGGCCATTAC ACAAAGACCG GCACCCGGAT CGACATGCCC
GCCGAGCTGC CGGATTTCGC GCAGATCGAC CGGCTGATCC TCGTGGCCTG CGGCACGGCC
TTCTATGCCT GCCAGACCGC GAAATACTGG TTCGAGCAGC TGACCGGCCT GCCCGTGGAC
ATCGACATCG CGTCGGAGTT CCGCTACCGC AGCCCGCCCA TCGGGCCGCG CACCGCAGCC
CTGTTCGTCA GCCAGTCGGG CGAGACCGCC GATACCCTGG CGGCCCTGCG CTACTGCGCA
GGCAAGGCCG ACCACATCCT GTCGATCTGC AACGTGCCGC AAAGCTCCAT CGCCCGCGAA
AGCACCGTCG CCCTGCCGAC CCTCGCGGGC GTCGAGATCG GCGTCGCCTC GACCAAGGCC
TTCACCTGCC AGCTCACCGT GCTGGCGCTG CTGGCGCTGC ACGCCGCCCG ACAGCGGGGC
CATTGCGACG ACGCAACCCT GGCCGAACAT CTGACCGCCC TGCGCGGCCT GCCCGGCCTG
CTCAACCTCG CGCTGGGCCA GGAGGCCGAG ATCGAGACGG TCTCCCGCGA GCTGGCCGAG
GCCCGCGACA TCCTCTTTCT CGGGCGCGGC GCGATGTATC CCATCGCCCT GGAAGGTGCG
CTGAAACTCA AGGAAATCAG CTACATCCAC GCCGAAGGCT ACGCCTCGGG GGAGCTGAAA
CACGGCCCCA TCGCCCTGGT GGACCCCGCC GTTCCGGTGA TCGTCTTCGC CCCCACCGAC
CCGCTCTTCG ACAAGACCGT CTCGAACATG CAAGAGGTGA TGGCCCGCCA GGGCAAGGTC
CTGCTGGTCA GCGACGCCAC CGGTCTCGAC ACGGCCGGCC CCGGCAGCTG GGCCACGATC
CAGATGCCCC ATGTGTCGCC CTTCCTCGCC CCGATCCTCT ATGCGATCCC GGCGCAGCTG
CTGGCCTATC ACACGGCGGT CGCCAAGGGC ACGGATGTGG ACCAGCCCCG CAACCTCGCC
AAATCCGTCA CGGTGGAGTG A
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| Protein sequence | MCGIVGVLGH NQAAPLLVEA LKRLEYRGYD SAGVATVQDG HLDRRRAMGK LVNLSDLLVE
NPLAGKAGIG HTRWATHGVP SVSNAHPHQA GPVAVVHNGI IENFRALRAE LIADGANFES
ETDTETIAQL CARELRAGAT PVEAARRTIA RLEGAFALCF LFDGHDDLLI AARKGSPLAI
GHGDGEMFVG SDALALHPMT DRITYLEEGD WAVVTRAGVQ VFDARDTEVL RPETHARIDG
TQIGKGGHRH FMAKEIAEQP SVISDVLGHY TKTGTRIDMP AELPDFAQID RLILVACGTA
FYACQTAKYW FEQLTGLPVD IDIASEFRYR SPPIGPRTAA LFVSQSGETA DTLAALRYCA
GKADHILSIC NVPQSSIARE STVALPTLAG VEIGVASTKA FTCQLTVLAL LALHAARQRG
HCDDATLAEH LTALRGLPGL LNLALGQEAE IETVSRELAE ARDILFLGRG AMYPIALEGA
LKLKEISYIH AEGYASGELK HGPIALVDPA VPVIVFAPTD PLFDKTVSNM QEVMARQGKV
LLVSDATGLD TAGPGSWATI QMPHVSPFLA PILYAIPAQL LAYHTAVAKG TDVDQPRNLA
KSVTVE
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