Gene Dshi_1284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1284 
Symbol 
ID5711842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1337238 
End bp1337558 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content68% 
IMG OID641267196 
Productchorismate mutase related enzyme 
Protein accessionYP_001532627 
Protein GI159043833 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1605] Chorismate mutase 
TIGRFAM ID[TIGR01803] chorismate mutase related enzymes 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0206152 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.407727 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCGC CCGAAGACTG CAACTCCATG GCGGAACTGC GCGCCGCGAT CGACACGCTG 
GACAGATCCC TCGTGGCCCT TCTGGCCCGG CGCGCGGGCT ATATCGACCG GGCCATCGCC
CTGAAACCGG CCGAGAACCT GCCCGCCCGC ATCGAGGACC GCGTGGCGCA GGTCAAGGCA
AAGGTGCGGG CCGAGGCGGC CACGCAGGGC CTCGACGCCG ACCTCGTCGA GGGGCTCTGG
CACCAGCTGA TCGAGTGGTC CATCGCTCGG GAAGAGGTGG TTCTGGGCGC GGACGCTCCG
AAAGAGACAA GAGAGATATG A
 
Protein sequence
MRAPEDCNSM AELRAAIDTL DRSLVALLAR RAGYIDRAIA LKPAENLPAR IEDRVAQVKA 
KVRAEAATQG LDADLVEGLW HQLIEWSIAR EEVVLGADAP KETREI