Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1283 |
Symbol | fhs |
ID | 5711841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 1335512 |
End bp | 1337179 |
Gene Length | 1668 bp |
Protein Length | 555 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641267195 |
Product | formate--tetrahydrofolate ligase |
Protein accession | YP_001532626 |
Protein GI | 159043832 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2759] Formyltetrahydrofolate synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0499733 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.578688 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGATA TCGAGATTGC CCGCGCCGCC ACCAAGAAAC CGATCCAGCA GATCGGCGCC ACCCTCGGCA TCGGCGCGGA CGACCTGCTG CCCTACGGCC ATGACAAGGC CAAGGTCAGC CAATCCTTCA TCACCTCGGT GCAGGACCGC CCCAATGGCA AGCTGATCCT GGTGACCGCG ATCAACCCGA CCCCCGCGGG CGAGGGCAAG ACCACCACCA CCGTGGGCCT GGGCGACGGG CTCAACCGGA TCGGCAAGAA GGCCTGCGTG TGCATCCGCG AAGCCTCCCT CGGGCCGAAT TTCGGGATGA AGGGCGGCGC GGCGGGCGGC GGCCATGCCC AGGTCATCCC GATGGAGGAC ATGAACCTCC ACTTCACCGG CGATTTCCAC GCGATCACCT CGGCCCATTC GCTGCTCTCG GCGATGATCG ACAACCACAT CTACTGGGGC AACGAGCTGG AGATCGACAT CCGCCGCGTC ACCTGGCGGC GTGTGGTGGA CATGAACGAC CGCGCCCTGC GCCAGATCAC GGCGAGCCTC GGCGGGGTGG CCAACGGCTT TCCGCGCGAG GCGGGGTTCG ACATCACCGT CGCCTCCGAG GTCATGGCGA TCCTGTGCCT GGCGCGCGAT CTCAAGGACC TCGAACAGCG CCTGGGCGAC ATGATCGTGG CCTACCGGCG CGACCGCTCC CCGGTCTATT GCCGCGACAT CAAGGCCGAA GGGGCGATGA CCGTGCTGCT CAAGGACGCG ATGCAGCCCA ACCTCGTGCA GACGCTGGAA AACAACCCGG CCTTCGTCCA TGGCGGCCCG TTCGCCAATA TCGCCCATGG CTGCAATTCG GTCATCGCCA CGACCACGGC GCTGAAACTG GCGGATTTCG TGGTGACCGA GGCGGGCTTC GGCGCCGATC TGGGCGCCGA GAAGTTCATG AACATCAAGT GCCGCAAGGC CGGCCTCGCC CCCGATTGCG TGGTGCTGGT GGCCACCGTG CGCGCGATGA AGATGAACGG TGGTGTCGCC AAGGCCGATC TGGGCGCCGA GAACGTCGCG GCCGTGCAGG CGGGCTGCGC CAATCTCGGC CGCCATATCG GCAACCTCCA GGGCTTCGGC GTGCCCGTAG TCGTGGCGAT CAACCATTTC GTCACCGACA CCGAGGCCGA GATCCAGGCG GTCAAGGACT ATGTCGCGGG GCAGGGGGCC GAGGCCATCC TGTCGCGCCA TTGGGAACTG GGCTCCGAAG GCTCCGCCGC GTTGGCCACG CGGGTTGCCG AGATCGCCGA GAGCGGCGCG TCGCAATTCT CCCCGCTCTA TCCCGACGCG ATGCCCCTGC TGGAGAAGAT CGAAACCATC GCCAAGCGGA TCTACCACGC CGAGAAGGTG ATCGCCGATA ACAAGATCGT GGATCAACTC AAGCTCTGGG AAGAGCAGGG CTATGGCCAC CTGCCGATCT GCATGGCCAA GACCCAGTAT TCGTTTTCCA CCGACCCCAA TGAACGCGGC GCGCCCACGG GCCATGCGAT CCCCGTGCGC GAAGTGCGCC TGTCGGCGGG CGCGGGCTTC GTCGTGGTGG TCTGTGGCGA GATCATGACC ATGCCGGGTC TGCCCCGCGT GCCCTCGGCC GAACATATCC GGCTCAATGA CGCAGGCGAG GTCGAAGGCC TGTTCTAG
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Protein sequence | MSDIEIARAA TKKPIQQIGA TLGIGADDLL PYGHDKAKVS QSFITSVQDR PNGKLILVTA INPTPAGEGK TTTTVGLGDG LNRIGKKACV CIREASLGPN FGMKGGAAGG GHAQVIPMED MNLHFTGDFH AITSAHSLLS AMIDNHIYWG NELEIDIRRV TWRRVVDMND RALRQITASL GGVANGFPRE AGFDITVASE VMAILCLARD LKDLEQRLGD MIVAYRRDRS PVYCRDIKAE GAMTVLLKDA MQPNLVQTLE NNPAFVHGGP FANIAHGCNS VIATTTALKL ADFVVTEAGF GADLGAEKFM NIKCRKAGLA PDCVVLVATV RAMKMNGGVA KADLGAENVA AVQAGCANLG RHIGNLQGFG VPVVVAINHF VTDTEAEIQA VKDYVAGQGA EAILSRHWEL GSEGSAALAT RVAEIAESGA SQFSPLYPDA MPLLEKIETI AKRIYHAEKV IADNKIVDQL KLWEEQGYGH LPICMAKTQY SFSTDPNERG APTGHAIPVR EVRLSAGAGF VVVVCGEIMT MPGLPRVPSA EHIRLNDAGE VEGLF
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