| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1275 |
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| Symbol | |
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| ID | 5711833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1325167 |
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| End bp | 1326291 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641267187 |
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| Product | monosaccharide-transporting ATPase |
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| Protein accession | YP_001532618 |
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| Protein GI | 159043824 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0850984 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.367155 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAGA CAGCACCGCC GGCGCCCGTT GTCGATGAAC GTATCAAACA GACATCGAAG
TTCCGTCAGG CCCTGATCCG TCCCGAGTTG GGCGGGATCT GCGGCACTGT CATCGTCTTT
GTCTTCTTCT TTCTGACCGC CTTCGACAGC GGCATGTTCA CGCCGCAAGG GGTCCTGAAC
TGGACCCTTG TCTCGGCACA ATTCATGATC ATCGCCGTGG GCGCGTGCCT GTTGATGATC
GCGGGCGAGT TTGACCTGTC GGTCGGCTCG ATGATCGGCT TCGCGGGCAT GATGATCGCG
GTCTTCGGCG TGGTGCTGGC CTGGCCCATG TGGATCGCCA TCCTGATCAC CTTCGCCATT
TGCCTGTCCA TCGGGGCACT GAATGGCGCG ATCGTGATCC GAACCGGCCT GCCGAGCTTC
ATCGTGACGC TCGCTTTCTT GTTCATCCTG CGTGGCTTCA CCATCTTCAT CCCCCAGACG
CTGGAAAGCA AAACCATCAT CGGAGGCATC CGCGACGCGG CCGAAGGCGA CTGGCTGGCG
CCGGTCTTCG GCGGCAAGAT CGGCAACGGG TTTTTCCAAT GGCTCGGCGA TATCGGCGTG
ATCGAGACCT TCTCTCGCGG TAACCGCGCG GGGGAGGCGG TGATCGACGG TCTGCCCATG
CTGGTGATCT GGGCGCTGCT GCTGATCGCA TTCGGTCATA TCCTGCTGAC CCGCACCCGC
TTCGGCAACT GGATCTTCGC CGCCGGCGGG GATGCGGAGG CCGCGCGCAA TTCCGGCGTG
CCCGTGAACA AGGTCAAGAT CCTGATGTTC ATGTTTACCG CCTTCTGCGC CTGCGTCTTC
GCCACCTGCC AGGTGATGGA GTTCGGCTCT GCGGGCGCGG ATCGCGGGCT TCTGAAGGAA
TTCGAGGCGA TCATCGCCGT GGTGATCGGC GGCGCGCTCC TGACCGGCGG TTACGGGTCG
GTGATCGGGG CGGCCCTTGG TGCGCTGATC TTCGGCGTGG TCCAGCAGGG GCTGTTTTTC
GCCGGGGTCG AAAGCTCGCT CTTCCGGGTG TTCCTGGGGG TCATCCTGCT CGGCGCGGTG
ATCCTGAACA CTTATATCCG GCGCATGATC ACGGGGGAGC GTTGA
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| Protein sequence | MTETAPPAPV VDERIKQTSK FRQALIRPEL GGICGTVIVF VFFFLTAFDS GMFTPQGVLN
WTLVSAQFMI IAVGACLLMI AGEFDLSVGS MIGFAGMMIA VFGVVLAWPM WIAILITFAI
CLSIGALNGA IVIRTGLPSF IVTLAFLFIL RGFTIFIPQT LESKTIIGGI RDAAEGDWLA
PVFGGKIGNG FFQWLGDIGV IETFSRGNRA GEAVIDGLPM LVIWALLLIA FGHILLTRTR
FGNWIFAAGG DAEAARNSGV PVNKVKILMF MFTAFCACVF ATCQVMEFGS AGADRGLLKE
FEAIIAVVIG GALLTGGYGS VIGAALGALI FGVVQQGLFF AGVESSLFRV FLGVILLGAV
ILNTYIRRMI TGER
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