| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1274 |
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| Symbol | |
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| ID | 5711832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1324124 |
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| End bp | 1325101 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641267186 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001532617 |
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| Protein GI | 159043823 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.031802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.351389 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCGG ACATAGTCTG GGAGGACGAC ATGAAAACCA TCCTGAAATC GGTGGCGCTT
GGTGCCGCAC TGGTCGCGGC ACCTTTCGCA TCCTTCGCGC AGAGTGACGA TGATCTGAAT
TACGTGCTGG TCAGCCATGC ACCCGACAGT GACACCTGGT GGAACACCAT CAAGAACGGC
ATCGCGCTGG CGGGCGAGCA GATGGGCGTG TCGGTCGAAT ACCGCAACCC GCCCACCGGT
GACATTGCCG ACATGGCGCG AATCATCGAG CAGGCCGCGG CCTCCGCGCC CGATGGCATC
ATCACCACGC TGGCGGATTT CGACGTGCTG CAAGGGCCGA TCAAGAACGC GGTCGATCAG
GGCATCGATG TCATCATCAT GAATACCGGC ACACCCGAAC AGGCCCGCGA GATCGGCGCC
CTGATGTATG TCGGCCAGCC CGAGTACGAC GCGGGCTTCG CCGCCGGGCA GCGCGCCAAG
GGCGAGGGGG TCACCAAGTT TCTTTGCGTG AACCACGCGA TCCAGCAGCC CACCGTGGGC
GAGCGCTGCC GCGGCTATGC CGACGGGCTC GGGATCGAGC TGGGCGATGC GATGATGGAC
AGCGGCACCG ACCCCGCCGA GATCAAGAAC AAGGTCATGG CCTACCTGTC CACGAATGAA
GACGTCGATG GCATCCTGAC CCTCGGCCCG GTCTCGGCGG ACCCGACCAT CGCGGCGCTG
AACGAGATGG GCCTGGCGGG CGAAATCCAT TTCGGCACCT TCGATCTGGG CGAGGAAATC
GTGAAGGCGA TCAAGGACGG CACCATCAAC TGGGGCATCG ACCAGCAGCC CTTCCTGCAG
GCCTACATGC CGGTGGTGAT CCTGGCCAAC TGGGACCGCT ACGGGGTTTT GCCGGGCAAC
AACATCAACT CCGGCCCAGG CTTCGTGACC GCCTCCGGTC TGGAGAAGGT CGAGGCCTTC
GCGGGCGAGT ACCGCTAA
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| Protein sequence | MRADIVWEDD MKTILKSVAL GAALVAAPFA SFAQSDDDLN YVLVSHAPDS DTWWNTIKNG
IALAGEQMGV SVEYRNPPTG DIADMARIIE QAAASAPDGI ITTLADFDVL QGPIKNAVDQ
GIDVIIMNTG TPEQAREIGA LMYVGQPEYD AGFAAGQRAK GEGVTKFLCV NHAIQQPTVG
ERCRGYADGL GIELGDAMMD SGTDPAEIKN KVMAYLSTNE DVDGILTLGP VSADPTIAAL
NEMGLAGEIH FGTFDLGEEI VKAIKDGTIN WGIDQQPFLQ AYMPVVILAN WDRYGVLPGN
NINSGPGFVT ASGLEKVEAF AGEYR
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