Gene Dshi_1267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1267 
SymboliolB 
ID5711825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1315974 
End bp1316834 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content63% 
IMG OID641267179 
Producthypothetical protein 
Protein accessionYP_001532610 
Protein GI159043816 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3718] Uncharacterized enzyme involved in inositol metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.647401 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.894708 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATATCG CCCCCCATGA CAACCGCAAC AAACCCATCG TGGACGCAGG CGACGCCCTC 
GTCCCGCTGA ACTACTTCAA CATCGTCAAG CTGAAGAAGG GCGAAAGCTT CGGCTACGCG
GTCCCCGGCT ACGAGACCTG CATCGTGCCC GCCACCGGGC TGATCGACGT GACCGTGGGG
GGGTTTTCCG CCGACAAGCT CGGCGGGCGC GGCGTGGATG TCTGGGACGG GGAGCCCGAG
GGCGTCTATG TCCCCACCGG CCAGGAGGCG CGGTTCACCT GCCTGTCTGA CACGGCCGAG
GTGTTCATCG CGGGTGCGAA GTTCGACACC GTTCTGGAGC CGTTCGCCGT GCGCGCAGAC
GAGCTGGACC TGGTTCAATA CGGCTCCGAC GACACCAAGA CCCATCGCAA GATCAAGCAT
ATCCTCGGCG CCAACCAGCA CGGGCGCGTG GGTCGCTTGC TGGTCTCGGA ATTGTTCACC
GTGGGTGCGG GTGGCTGGTC GGGGTTTCCC AGCCACAAGC ACGACACCGA CCGACAGGAC
CCGGCCACGG GCGAGATGAT CGAGACCCGC CATGACGAGA CCTACAATTT CCGCTTCCGG
CCCAATTACG GCTCCGGGCT GCAGATGCTG CAGCGCGCCG ACAACGCGCC GGGCGATGCC
TATCATATCA TGGATGGCTC CACGATCTGC ATCGACAAGG GCTACCACCC CTGCTGCGCC
CTGCCCGGTT ACGAGATGTA TTACTTCACC ATTCTCGGCG GGTTGAGCCA GCGCAGCCTG
AAGCAGTATT TCCAGCCCAC CCATGCGGAG CAGCTGCATA CCATCCCCGG GATCATGGAC
ATGGTGGCCA AGTTCAAATG A
 
Protein sequence
MHIAPHDNRN KPIVDAGDAL VPLNYFNIVK LKKGESFGYA VPGYETCIVP ATGLIDVTVG 
GFSADKLGGR GVDVWDGEPE GVYVPTGQEA RFTCLSDTAE VFIAGAKFDT VLEPFAVRAD
ELDLVQYGSD DTKTHRKIKH ILGANQHGRV GRLLVSELFT VGAGGWSGFP SHKHDTDRQD
PATGEMIETR HDETYNFRFR PNYGSGLQML QRADNAPGDA YHIMDGSTIC IDKGYHPCCA
LPGYEMYYFT ILGGLSQRSL KQYFQPTHAE QLHTIPGIMD MVAKFK