Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1267 |
Symbol | iolB |
ID | 5711825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 1315974 |
End bp | 1316834 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641267179 |
Product | hypothetical protein |
Protein accession | YP_001532610 |
Protein GI | 159043816 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3718] Uncharacterized enzyme involved in inositol metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.647401 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.894708 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATATCG CCCCCCATGA CAACCGCAAC AAACCCATCG TGGACGCAGG CGACGCCCTC GTCCCGCTGA ACTACTTCAA CATCGTCAAG CTGAAGAAGG GCGAAAGCTT CGGCTACGCG GTCCCCGGCT ACGAGACCTG CATCGTGCCC GCCACCGGGC TGATCGACGT GACCGTGGGG GGGTTTTCCG CCGACAAGCT CGGCGGGCGC GGCGTGGATG TCTGGGACGG GGAGCCCGAG GGCGTCTATG TCCCCACCGG CCAGGAGGCG CGGTTCACCT GCCTGTCTGA CACGGCCGAG GTGTTCATCG CGGGTGCGAA GTTCGACACC GTTCTGGAGC CGTTCGCCGT GCGCGCAGAC GAGCTGGACC TGGTTCAATA CGGCTCCGAC GACACCAAGA CCCATCGCAA GATCAAGCAT ATCCTCGGCG CCAACCAGCA CGGGCGCGTG GGTCGCTTGC TGGTCTCGGA ATTGTTCACC GTGGGTGCGG GTGGCTGGTC GGGGTTTCCC AGCCACAAGC ACGACACCGA CCGACAGGAC CCGGCCACGG GCGAGATGAT CGAGACCCGC CATGACGAGA CCTACAATTT CCGCTTCCGG CCCAATTACG GCTCCGGGCT GCAGATGCTG CAGCGCGCCG ACAACGCGCC GGGCGATGCC TATCATATCA TGGATGGCTC CACGATCTGC ATCGACAAGG GCTACCACCC CTGCTGCGCC CTGCCCGGTT ACGAGATGTA TTACTTCACC ATTCTCGGCG GGTTGAGCCA GCGCAGCCTG AAGCAGTATT TCCAGCCCAC CCATGCGGAG CAGCTGCATA CCATCCCCGG GATCATGGAC ATGGTGGCCA AGTTCAAATG A
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Protein sequence | MHIAPHDNRN KPIVDAGDAL VPLNYFNIVK LKKGESFGYA VPGYETCIVP ATGLIDVTVG GFSADKLGGR GVDVWDGEPE GVYVPTGQEA RFTCLSDTAE VFIAGAKFDT VLEPFAVRAD ELDLVQYGSD DTKTHRKIKH ILGANQHGRV GRLLVSELFT VGAGGWSGFP SHKHDTDRQD PATGEMIETR HDETYNFRFR PNYGSGLQML QRADNAPGDA YHIMDGSTIC IDKGYHPCCA LPGYEMYYFT ILGGLSQRSL KQYFQPTHAE QLHTIPGIMD MVAKFK
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