Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1259 |
Symbol | |
ID | 5711817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 1305092 |
End bp | 1307596 |
Gene Length | 2505 bp |
Protein Length | 834 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641267171 |
Product | heavy metal translocating P-type ATPase |
Protein accession | YP_001532602 |
Protein GI | 159043808 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase [COG2608] Copper chaperone |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01511] copper-(or silver)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.499676 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAAC CCATGACCGT TTCGCTGTCC CTTACGGGAA TGACCTGTGC GTCCTGCGTC GGGCGGGTCG AGCGTGCCCT GGCCGAACGC CCTGGTGTGC GCGATGTGTC GGTGAACCTG GCTACCGAGA CCGCGCGGAT GACGCTGGCG CAGCCGGATG CCTTGCCGGA TCTGGTCGAG ATGCTGACCA CCAGGGGATA CGCGCCGCGG GAGGCCACCA TTTCGTTGCG CGTGGCCGAG ATGTCCTGCG CCTCCTGCGT CGGGCGGGTG GAGCGGATCC TGCAGGCGGA GCCGGGTGTT CTGGAGGCCT CGGTCAACCT GGGCACCGAA ACCGCGACCG TGCGGGTGCT CGACGGGGTG ACTAGCCCTG CACGGCTGAT CGCGCGGTGC AGCGAGGGCG GGTTTCCCGC GCGTTTGGCG GCGACCGATG AAGCGCCCGC CCGTGCGCAG CGCCAGCGGG ACGAAGCCGA GGCGATGGCG CGCAGGGTGG CAGGGGCCGC GGCGCTGGCC CTGCCGGTCT TCATCCTGGA GATGGGCAGT CACATGGTGC CCGCCTTTCA TCACTGGATC ATGGCGACCA TCGGGATGCA GACCTCGTGG CTTCTGCAAT TCGTGCTGAC CAGCCTGGTT CTTTTCGGCC CCGGGCGGCT GTTTTTCGTC AAGGGCGCGC AAAGCCTTGC CCATGGGACG CCGGACATGA ATGCGCTGGT GGCGCTGGGG ACCGGAGCGG CCTGGTCCTA TTCGGTGGTG GCGACCTTCT TCCCCGCGCT GCTGCCAGAG GCGAGCCGTG CGGTCTATTT CGAGGCTGCC GCGGTGATCG TGGTGCTGAT CCTCGTGGGA CGCTGGCTGG AGGCGCGCGC CAAGGGCCGC ACCGGGGCCG CCATCGAGGG CTTGCTCGGT TTGCAGGTCA AGACCGCCCG GTTGATCCGG GGCGACGACA TCGCCGAAGT GCCGGTAGAG GCGCTGGGGC CCGGGGACCA TGTTCTGGTG CGCCCGGGGG AGCGGTTGCC GGTCGATGGC ACCGTGATCG CGGGCACGAG CAATGTGGAC GAGAGCATGA TCACCGGCGA GCCGATGCCC GTACCGAAAG CCGCTGGCGC CGAGGTGACG GGCGGCACGG TCAACGGCAC CGGCAGCCTG AGCGTCGCGG TTACGCGCAC GGGGGGCGAC ACGGTGCTGG CGCAGATCAT TCGTATGGTC GAACAGGCCC AGGGCGCCAA GCTGCCGATC CAGGGGCTGG TCGACCGGGT GACCCTGTGG TTCGTGCCGA TCGTCCTGGG GATCGCGGCG CTGACGGTCG CGGTCTGGCT CGCGCTCGGG CCGGGGCTGG GTTTTGCGCT CGTGGCCGGG GTGTCGGTGC TGATCATCGC GTGCCCCTGT GCCATGGGCC TGGCGACGCC GACCTCGATC ATGGTCGGCA CCGGCCGTGC GGCGGAGATG GGGGTTCTGT TCCGCAAGGG CGATGCGCTG CAGGCGCTGG CGGATGTGGA CATGATCGCG CTCGACAAGA CCGGCACCGT GACCGAAGGC CGTCCCGTGC TGACCGACCT CGAACTTGCG ACAGGCTGGG CGCGCGCCGA AGTGCTCGCC CTGATGGCGG GGGTCGAGAT GGCGTCGGAG CATCCCGTGG GCGCGGCGGT CGTGCGCGCG GCCCGCGGCG AAGGGGTCGT GCCCGAGAGG GCAACGGATG TTGAAAGCCA CACCGGGCGC GGTATCTCCG GCACGGTGTC GGGGCGGCGC GTCCTCGTCG GCACCGCCCG CCTGATGGCG GAGGAGGGGG TCGAGACCGG GCGGTTGGCC GAACGGGCCG CCGCCCTCGC AGAGCAGGGC CATACGGTGT TCTTCGTCGC GGTCGAGGGG GCACTGGCGG CGATTGCCGC GGTCTCCGAC CCCATAAAGC CGACGAGCAA GGCAGCGATT GCTGCGCTCA AGACGCAGGG CGTTGATGTC GCGCTGATCA CCGGGGATAA CGAAGGTACC GCCCGCGCCG TGGCCCGTGC CGTCGGCATC GACCACGTGG TGGCGGGCGT TCTGCCCGAG GGCAAGGTCG CCGCCCTCGA AGCGATGCGC GCCGAGGGTC GCAAGCTGGC CTTCGTCGGC GACGGAATCA ACGACGCCCC GGCACTGGCC CATGCGGATG TGGGTGTGGC GATCGGGACG GGCACGGATA TCGCGATCGA GAGCGCGGAT GTGGTGCTGA TGTCCGGGGA CCTGCGCGGC GTGGTCAATG CGCGCGACGT GTCGCGGCGG ACCATGCGCA ACATCAAGCA GAACCTCGGC TGGGCCTTCG GCTACAACGC CGCGCTGATC CCGGTGGCGG CCGGGGTGCT CTATCCGGCG TTCGGCATCC TTCTGTCGCC GATCTTCGCA GCGGGGGCCA TGGCGCTGTC GTCGGTGTCG GTCCTGGGCA ACGCGCTGCG GCTGCGCCGT GTCCGCCCGC AACAAAGCAT GGACACCCAG GGCCCGCAGG GCGCCGTGGC CGCGGAGCCG CAACCGGCGG AATGA
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Protein sequence | MSEPMTVSLS LTGMTCASCV GRVERALAER PGVRDVSVNL ATETARMTLA QPDALPDLVE MLTTRGYAPR EATISLRVAE MSCASCVGRV ERILQAEPGV LEASVNLGTE TATVRVLDGV TSPARLIARC SEGGFPARLA ATDEAPARAQ RQRDEAEAMA RRVAGAAALA LPVFILEMGS HMVPAFHHWI MATIGMQTSW LLQFVLTSLV LFGPGRLFFV KGAQSLAHGT PDMNALVALG TGAAWSYSVV ATFFPALLPE ASRAVYFEAA AVIVVLILVG RWLEARAKGR TGAAIEGLLG LQVKTARLIR GDDIAEVPVE ALGPGDHVLV RPGERLPVDG TVIAGTSNVD ESMITGEPMP VPKAAGAEVT GGTVNGTGSL SVAVTRTGGD TVLAQIIRMV EQAQGAKLPI QGLVDRVTLW FVPIVLGIAA LTVAVWLALG PGLGFALVAG VSVLIIACPC AMGLATPTSI MVGTGRAAEM GVLFRKGDAL QALADVDMIA LDKTGTVTEG RPVLTDLELA TGWARAEVLA LMAGVEMASE HPVGAAVVRA ARGEGVVPER ATDVESHTGR GISGTVSGRR VLVGTARLMA EEGVETGRLA ERAAALAEQG HTVFFVAVEG ALAAIAAVSD PIKPTSKAAI AALKTQGVDV ALITGDNEGT ARAVARAVGI DHVVAGVLPE GKVAALEAMR AEGRKLAFVG DGINDAPALA HADVGVAIGT GTDIAIESAD VVLMSGDLRG VVNARDVSRR TMRNIKQNLG WAFGYNAALI PVAAGVLYPA FGILLSPIFA AGAMALSSVS VLGNALRLRR VRPQQSMDTQ GPQGAVAAEP QPAE
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