| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1256 |
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| Symbol | |
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| ID | 5711814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1303304 |
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| End bp | 1303924 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641267168 |
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| Product | exopolysaccharide synthesis ExoD |
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| Protein accession | YP_001532599 |
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| Protein GI | 159043805 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3932] Uncharacterized ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0776833 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.796011 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGACG TGAGCTCACA ACACGCGGCA GAGGCGGAGG CGTCCTTCGG GGATTGGTCG
ATGACCCGCA TCCTCGATTG CGCGATGGAT GTCTCGGACC GCGAGGATGT CTGCGTGGGG
GATATGATCG CGGCCTTCGG GCCCGCGAGT TTCTTGCCAC TGCTGCTGAT GCCTGCGATG
CTCCTCGTGT CGCCACTGAG TGGAATCCCC TTGTTTTCAA GCTTTTGCGC GGTGTTGATC
ATCCTAGTGG CAACGCAGAT GGTCGCTGGA CGCAGCTGCG TATGGTTGCC GGACTGGGTC
AAGCGCCGCA GCCTGTCGGG GCAACAGTTG CGCAAGGGGC TGGTACGGGT CCGGCCGCTG
GCGGCCTGGT TCGACCGCAA TGCGCATCGG CGCATCGGCG TACTGTTCCG GCGGCCGATC
TGGTATGTCC TGCCCCTGAG CTGTGTCGGG CTGGCCGCGA TGATCCCGTT TCTCGAACTG
GTGCCGTTCT CGTCGTCATT GCTCGGGCTT GCGGTGGTGT TCATCAGCCT CGGGATGCTG
ACCCGGGACG GGCTCTGGGT GCTGGCCGGG ATGGTGCCGT TCATAGGTGC CCTGACCATC
GTGTCGAAAG TGCTGACCTG A
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| Protein sequence | MADVSSQHAA EAEASFGDWS MTRILDCAMD VSDREDVCVG DMIAAFGPAS FLPLLLMPAM
LLVSPLSGIP LFSSFCAVLI ILVATQMVAG RSCVWLPDWV KRRSLSGQQL RKGLVRVRPL
AAWFDRNAHR RIGVLFRRPI WYVLPLSCVG LAAMIPFLEL VPFSSSLLGL AVVFISLGML
TRDGLWVLAG MVPFIGALTI VSKVLT
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