| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1254 |
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| Symbol | |
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| ID | 5711812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1300949 |
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| End bp | 1301971 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641267166 |
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| Product | glyceraldehyde-3-phosphate dehydrogenase |
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| Protein accession | YP_001532597 |
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| Protein GI | 159043803 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.148048 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.506898 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACAC CGCGCCCGAG AGTCGCGCTC AACGGCCTTG GCCGGATTGG AAAACTCGTG
CTGCGCGCGT TTTTCGACGA GGGGTTGGAG GCCGATCTGG TCCTTCTGAA CGACCCCGTT
GCAACACCGG AACAGCACGC GCTGCTGCTG GAGTTCGACA CGGTGCACGG CCGTTGGGAG
GCGGTGATCG CCCATGACGC CGACAGCCTG ACGATCAATG GCACCTCTGT GCGCTTGACC
CAAGCTGCGC GGATCGAAGA TCTGCCCTTG CGCGAGATGG GCGTGGACGT GGTGCTGGAT
TGCACGGGCG TGTTCAAGAC CGCCGCGAAG ACCGCGCCCT ATTTCGATGC AGGCGTCAGG
AAGGTCGTGG TGTCGGCACC GGTCAAGGAC GGCGGCGCGG TGAACCTGGT CTACGGGGTC
AACCACGACT TGTACGACCC TGCGGCACAC CGGCTGATCA CGGCGGCGAG TTGTACGACC
AATTGCCTGG CGCCCGTGGT CAAGGTCCTC CATGAAGGGA TCGGACTCCG GCACGGGTCG
ATCACGACGA TCCACGATGT GACCAACACC CAGACCATCG TCGACCGCCC GGCCAAGGAC
ATGCGGCGCG CGCGGTCGGC GCTTAACTCG CTGATCCCGA CGACCACCGG GTCCGCGACC
GCGATCACCC TGATCTACCC GGAACTGAAG GGGCGGCTGA ACGGGCACGC GGTGCGGGTG
CCTTTGCTCA ATGCCTCCCT GACCGACTGC GTGTTCGAGA TGGCGCGCGA AACCAGCGTC
GAGGAGGTCA ACGGGCTTCT CAAGGCGGCC TCTCAGGGGG CTCTGGCGGG CATCTTGGGG
TACGAAGAAC GCCCGCTCGT TTCCGCCGAC TACACCAATG ATCCGCGCTC CGCGATCATC
GATGCGCCAA GCACGATGGT CGTCAATGGC ACGCAGGTGA AGGTTTATGC CTGGTACGAC
AACGAGTATG GCTATGCGTG GCGTCTGGCG GATGTGACGC GCATGGTGCT GGAAAGCCTG
TGA
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| Protein sequence | MTTPRPRVAL NGLGRIGKLV LRAFFDEGLE ADLVLLNDPV ATPEQHALLL EFDTVHGRWE
AVIAHDADSL TINGTSVRLT QAARIEDLPL REMGVDVVLD CTGVFKTAAK TAPYFDAGVR
KVVVSAPVKD GGAVNLVYGV NHDLYDPAAH RLITAASCTT NCLAPVVKVL HEGIGLRHGS
ITTIHDVTNT QTIVDRPAKD MRRARSALNS LIPTTTGSAT AITLIYPELK GRLNGHAVRV
PLLNASLTDC VFEMARETSV EEVNGLLKAA SQGALAGILG YEERPLVSAD YTNDPRSAII
DAPSTMVVNG TQVKVYAWYD NEYGYAWRLA DVTRMVLESL
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