Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1253 |
Symbol | |
ID | 5711811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 1300089 |
End bp | 1300952 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641267165 |
Product | transcriptional regulator |
Protein accession | YP_001532596 |
Protein GI | 159043802 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0394] Protein-tyrosine-phosphatase [COG0640] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0585398 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.522722 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATCAA TAGATGCCAC CCACGCTTTC GATGCGCTGA GCCATCCCGC ACGGTTGGAG GTATTCCGCC TGTTGGTGCG GCGCGGGCCG AGCGGGGTGC GCCCGTCCGA CATTGCCGCG GCCTTGGGAC TCAAGCCCAA TACCTTGTCG GTCTACCTTG CGGCGCTGCA GGCCGCGGGG CTGGTTGCCT CCCAGCGGGC GGGTCGGGCG GTGCTCTACC GGGCGGAACT GCGCCGGGTG GGCGCGTTGG TGGATTACCT CGTCGATGAT TGCTGCCGGG GACGGCCTGA CCTGTGCAGC ACCCACCTGG ACATGACACC GATGTCGCGC GACGGGGCGG CGCGTGAGGC CCCGTTTCAT GTGCTTTTCC TCTGTACCGG AAACTCGGCC CGGTCGATTT TCGCCGAAGC GCTGCTGACC GAGCTTGGCG GGGCGCGCTT CGTGGCGCAT TCCGCTGGGC TTGATCCGGC CGCCGGTCTC AACCCCCGGG CGGTCGAGGT CTTGGAGCGG GCAGGCCACG ACGTCTCGAG CCTGCGCGCC AAGCCCGTGT CCGAGTTCCA GCGATCCGAT GCGCCGCGGA TGGATTTCGT CTTCACGGTC TGTGACCGGG CGGCGAACGA GCATTGCCCC CCCTGGCCGG GCCAGCCGAT GACGGGCCAT TGGGGCCTGC CGGACCCGGT CGCCGCCCAA GGGACCGAGG CGGAGAAATC TCTCGCCTTC GCCCAGACCT ACGCCCAGAT GCGCCGCCGG ATCGAAGGTT TCGTGGCCCT GCCGCTGCAA TCTCTGGACC GACTGGCACT GCAACAGCGC CTCGATGAGA TCGGGCGGCG CCCATCTTTC CAAAGCCGAG AGACACTGAC ATGA
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Protein sequence | MESIDATHAF DALSHPARLE VFRLLVRRGP SGVRPSDIAA ALGLKPNTLS VYLAALQAAG LVASQRAGRA VLYRAELRRV GALVDYLVDD CCRGRPDLCS THLDMTPMSR DGAAREAPFH VLFLCTGNSA RSIFAEALLT ELGGARFVAH SAGLDPAAGL NPRAVEVLER AGHDVSSLRA KPVSEFQRSD APRMDFVFTV CDRAANEHCP PWPGQPMTGH WGLPDPVAAQ GTEAEKSLAF AQTYAQMRRR IEGFVALPLQ SLDRLALQQR LDEIGRRPSF QSRETLT
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