| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1250 |
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| Symbol | |
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| ID | 5711808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1297453 |
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| End bp | 1298508 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641267162 |
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| Product | ABC transporter related |
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| Protein accession | YP_001532593 |
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| Protein GI | 159043799 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.440423 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGGGA TCACATTACG GGGCGCCGTC AAGCGGTACG GTGAAACGCA GGTCGTGCAT
GGCGTGGACC TGTCCATCGC GGATGGTGAG TTCTGCGTCT TTGTCGGCCC GTCCGGCTGC
GGCAAGTCCA CCCTGTTGCG GATGATCGCC GGGCTGGAAG AGACCAGCGA AGGCAGCATT
CATATCGGGG CGCGGGATGT CACCCGGCTG GATCCGTCCG AACGCGGTGT GGCGATGGTG
TTTCAGACCT ATGCGCTCTA TCCCCATATG ACCGTTGCGG AAAACATGGG CTTCGGGCTG
AAGATGAACG GCGTGCCCAA GGCGGAGATC AAGGCCAAGG TGGCCGCCGC CTCGGAGATC
CTGAAGCTGG ATGATTACCT CGCGCGCAAG CCCAAGGCCC TGTCGGGCGG GCAGCGGCAG
CGTGTGGCGA TCGGTCGGGC CATCGTGCGC GGCCCGGAGG TGTTCCTGTT CGACGAGCCG
TTGTCCAACC TCGATGCGGA GTTGCGGGTC GAGATGCGGG TGGAGATCGC GCGCCTGCAC
AAGGAGATCG GCGCCACGAT GATCTACGTG ACCCATGACC AGGTCGAGGC GATGACGCTG
GCCGACAAGA TCGTGGTGCT GCGGGCCGGC CGGGTGGAGC AGGTGGGCGC CCCGCTGGAG
CTCTACCGCG ACCCGGACAA CGTGTTCGTG GCGGGGTTCA TCGGGTCTCC GGCGATGAAT
TTCCTCGATG GTCGGATCGA GAACGACGCC GTGCATCTCG CCGGGCTTCC GCCCCTGCCG
GTGCCGGGTG CCGCGGGCCG GTCGGGTCCG GTGACTGTGG GGGTGCGTCC GCAGCACATC
GCGCTGGAGC CCGGGGGGGA CGGGTATCTG GTGGAGTTGA CGGAGTCCCT GGGCGGGGTG
TCGTACCTCT ATCTGCGTGG GGCGGACGGC TCCAGGCTGA CGGTGGAGGC GGGCGAGGAA
GACCCGATCG CCGAGGGCAC GCCCGTGGGG CTGTCCCTGG CGCCGGACCG GGTCATGCTG
TTCGAGGCGG AGACCGGCCA GCGCCTGCGC GGCTGA
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| Protein sequence | MSGITLRGAV KRYGETQVVH GVDLSIADGE FCVFVGPSGC GKSTLLRMIA GLEETSEGSI
HIGARDVTRL DPSERGVAMV FQTYALYPHM TVAENMGFGL KMNGVPKAEI KAKVAAASEI
LKLDDYLARK PKALSGGQRQ RVAIGRAIVR GPEVFLFDEP LSNLDAELRV EMRVEIARLH
KEIGATMIYV THDQVEAMTL ADKIVVLRAG RVEQVGAPLE LYRDPDNVFV AGFIGSPAMN
FLDGRIENDA VHLAGLPPLP VPGAAGRSGP VTVGVRPQHI ALEPGGDGYL VELTESLGGV
SYLYLRGADG SRLTVEAGEE DPIAEGTPVG LSLAPDRVML FEAETGQRLR G
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