| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1244 |
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| Symbol | ilvD2 |
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| ID | 5711802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1290292 |
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| End bp | 1292001 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641267156 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001532587 |
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| Protein GI | 159043793 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.973257 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.411371 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACCG ATCGCCGCAA CCGTGCCTGG TATGGCAAGC TCGACAAGGA CGGGTTCATC
CACCGGTCGT GGATGAAAAA CCAGGGCTTT CCCGACCATG TCTTCGATGG TCGTCCCGTG
ATCGGGATCT GCAACACCTG GTCCGAACTG ACCCCGTGCA ACCACGGCCT GCGCACCCTC
GCCGAAGGCG TCAAGCGCGG GGTATGGGAG GCCGGGGGCT TCCCGGTTGA GTTCCCCGTA
ATGTCCCTGG GCGAGACCCA GATGAAGCCG ACGGCCATGC TGTTTCGCAA CCTTCTGGCC
ATGGATGTCG AGGAATCGAT CCGCGCCTAC GGCATGGACG GGGTCGTCCT GCTGGGCGGG
TGTGACAAGA CCACGCCGGG GCAACTCATG GGCGCGGCCT CGGTGGACCT GCCTTCCATC
GTGGTCTCGG CGGGGCCGAT GCTGAATGGC AAGTATCGCG GGCAGGATAT CGGCTCCGGA
ACGGATGTGT GGAAATTCTC CGAAGCCGTG CGCGCGGGCG AGATGACGCT TGCGGATTTC
ATGAATGCCG AGGCCGGCAT GTCCCGCTCC GCCGGGGTCT GCATGACCAT GGGCACGGCC
TCGACCATGG CCAGCCTGGT CGAAGCGATG GGCATGTCCC TGCCCCTGAA CGCCGCCCTT
CCGGCGGTGG ACGCCCGCCG CATGGCGCTG GCGCATCTGA CGGGCAAGCG CATCGTCGAG
ATGGTCGAGG AAGACCTGCG CCCCAGCGCG ATCCTGACCA AACCCGCCTT CGAGAACGCC
ATCCTCGCCA ACGCTGCCGT GGGCGGGTCC ACGAACGCGG TGATGCACCT GCTCGCCCTT
GCGGGCCGGG CCGGTGTCGA CCTGACGCTC AAGGATTTCG AGATCGGAGG CGAGATCCCC
TTGCTGGTCA ACTGCATGCC ATCGGGCAAA TACCTGATGG AAGACTTCGC CTATGCCGGG
GGGATGCCCG TGGTTCTGTC GGAGTTGCGC GACCACCTGC GCCCGGCCAC CACGGTGCTG
GGCAAGGATA TCGCCGCCTA TACCGAGGGG GCAGAGTGCT TCAACCGGGA CGTCATCCAT
GCCTATGACG CACCTGTGAA ACCTGCTGCC GGGCTGCGGG TGCTCCGGGG CTCACTTGCG
CCCGATGGCG CCATCGTGAA ACCGTCGGCC GCCACGGACG CTCTGCTTGA GCACGAAGGC
CCGGCCTTCG TCTTCGAGAA CATCGAGGAC ATGAAGGCCA ATATCGACCG CGACGACCTG
CCGATCACAC CCGACACGAT CCTCGTGCTC AAAGGCTGCG GACCCAAGGG GTACCCCGGC
ATGCCCGAGG TCGGGAACAT GCCGATCCCG GCAAAACTAG TCCGCGAGGG CGTGCGTGAC
ATGATCCGGG TCTCGGATGC GCGCATGTCC GGCACCGCCT ATGGCACGGT GATCCTCCAT
GTGGCACCAG AGGCGCAGGC GGGCGGGCCG CTGGCGCTGG TCAAGACCGG CGACCGCATC
CGCGTCTCGG CCCGCGAGGG CGTGCTCGAC CTGTTGGTGG ATGCCACCGA ACTGGCGGCC
CGCCGCGCCG CATGGCAACC CGATCCGCCC CACTACACCC GCGGCTATGC CAAGCTCTAC
ATCGATCACG TCTTGCAGGC GGACCGCGGG GCCGACCTGG ATTTTCTGGT GGGCAAGGAC
ACCCGCCCCG TCACACGAGA GAGCCACTGA
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| Protein sequence | MTTDRRNRAW YGKLDKDGFI HRSWMKNQGF PDHVFDGRPV IGICNTWSEL TPCNHGLRTL
AEGVKRGVWE AGGFPVEFPV MSLGETQMKP TAMLFRNLLA MDVEESIRAY GMDGVVLLGG
CDKTTPGQLM GAASVDLPSI VVSAGPMLNG KYRGQDIGSG TDVWKFSEAV RAGEMTLADF
MNAEAGMSRS AGVCMTMGTA STMASLVEAM GMSLPLNAAL PAVDARRMAL AHLTGKRIVE
MVEEDLRPSA ILTKPAFENA ILANAAVGGS TNAVMHLLAL AGRAGVDLTL KDFEIGGEIP
LLVNCMPSGK YLMEDFAYAG GMPVVLSELR DHLRPATTVL GKDIAAYTEG AECFNRDVIH
AYDAPVKPAA GLRVLRGSLA PDGAIVKPSA ATDALLEHEG PAFVFENIED MKANIDRDDL
PITPDTILVL KGCGPKGYPG MPEVGNMPIP AKLVREGVRD MIRVSDARMS GTAYGTVILH
VAPEAQAGGP LALVKTGDRI RVSAREGVLD LLVDATELAA RRAAWQPDPP HYTRGYAKLY
IDHVLQADRG ADLDFLVGKD TRPVTRESH
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