Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1242 |
Symbol | dgoK |
ID | 5711800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 1288623 |
End bp | 1289519 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641267154 |
Product | 2-dehydro-3-deoxygalactonokinase |
Protein accession | YP_001532585 |
Protein GI | 159043791 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3734] 2-keto-3-deoxy-galactonokinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.502361 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.183094 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAACG ATACCTGGAT CGCGGTCGAC TGGGGCACCT CGCACTTGCG GGCCTGGCAC ATGGCTCAGG ATCGGGTTCT GGCCGAGGCG GCGTCGGATG CGGGCATGTC CGCCCTGGGC CGGGCCGATT TCGAAGCCGC CCTCCTGGCG CTGATCGCAG GATGGCTCGA CGGGCCGACG GATGTTCTGG CCTGCGGCAT GGTCGGCTCG CGCCAGGGCT GGCAGGAGGC CCCCTATTCC GCCGTCCCCT GCGCACCGCT CGGGGCTGCC CCGGTGCGGG CGCACGCCAC CGATCCACGC CTGCGGGTCC ACATTGTTCC GGGCCTGAAA CAGGTCCGTC CCGCCGACGT GATGCGCGGC GAGGAAACCC AGGTCGCCGG GTTTCTCGCG CGCAACCCGG GCTGGGATGG CGTGGTCTGC CTGCCGGGCA CCCATACGAA ATGGGCCCAT GTCAGCGCGG GCGAGGTCGT CAGTTTCCAG ACCTTCATGA CCGGCGAGCT TTACTTCACC CTCGCCCGCC ATTCGGTCCT GCGCCATTCG CTGACCGAGG CGGGCTGGGA CGCCGAGGCC TTCGCCGACG GGTTGAAGGA CGGCATGGCC CGACCCGAAC GCCTGGCTGC GCGGCTGTTC GGCCTGCGCG CCGCGGACCT GCTGGAAAAC GCATCGCCCG AGGCGACCCG CGCCCGGCTC TCCGGCCTGC TGATCGGGGC GGAGCTTGTG GCGGCGCGGC CCTATTGGCT AGGCCAGCAG GTGGCCCTCG TGGGCGCCGC CAAGGTGACC GGTCCCTACA AGAACGCCCT CGACCAGCAA GCCGTCCCCG TCCAGATCGC CGATGGGGCC GATATGGTGC GCGCAGGGCT CAAGGTCGCC CATGACAGCC TGAAGGAAAC CGCATGA
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Protein sequence | MTNDTWIAVD WGTSHLRAWH MAQDRVLAEA ASDAGMSALG RADFEAALLA LIAGWLDGPT DVLACGMVGS RQGWQEAPYS AVPCAPLGAA PVRAHATDPR LRVHIVPGLK QVRPADVMRG EETQVAGFLA RNPGWDGVVC LPGTHTKWAH VSAGEVVSFQ TFMTGELYFT LARHSVLRHS LTEAGWDAEA FADGLKDGMA RPERLAARLF GLRAADLLEN ASPEATRARL SGLLIGAELV AARPYWLGQQ VALVGAAKVT GPYKNALDQQ AVPVQIADGA DMVRAGLKVA HDSLKETA
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