| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1240 |
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| Symbol | |
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| ID | 5711798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1287164 |
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| End bp | 1288024 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641267152 |
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| Product | SMP-30/Gluconolaconase/LRE domain protein |
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| Protein accession | YP_001532583 |
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| Protein GI | 159043789 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3386] Gluconolactonase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.138164 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGCGA CGCTCTATGA CGACCGCCCT TGCGCCCTGG GCGAAGGGCC GCTCTGGCAC
CCGGAGCGGC AGCAGCTCTT CTGGTTCGAC ATCACCGGGC AGCGGATGCT GTCGCGCGAC
GGCGACACAC CGTTGGAATG GCAGTTCGAC GAGATGGTCT CGGCCGCAGG CTGGGTCGAT
CACGACACCC TCCTGATCGC GTCAGAGACC GCCCTTGTCA CATTTGACCT TGCGGAGGGC
GAGAGCCGCT TTGTCGCCCC GCTGGAAGCC GACCGCCCCG AGACCCGCTC CAACGATGGG
CGCGCGGACC CCTGGGGCGG GTTCTGGATC GGCACCATGG GCAAATCGGC CGAGCCCGGC
GCCGGAGCGA TCTATCGCCT CTTCGATGGG ACGCTGCGGC GGGTGGTGCG GGACGTGACC
ATCTCCAACG CGCTCTGCTT CGATGCCGCC CAAAGCTGCG CCTACTATGC CGACACCCCG
ACGCGGCAGG TGATGCGCCT GCCTCTGGAC GGCGATGGCT GGCCATCGGG CCCGGCAACC
GTGGCGGTCG ATCTGCGCGC CGAAGGGCTG AACCCGGACG GGGCGGTGAC CGATGCCGCA
GGCAACCTCT GGATCGCCCA ATGGGGCGCC GGGCGCGTCG CCTGCCACGC CCCCGACGGC
ACCTTCCTGC GCGCCTTGGC CTGCGGCGGC CGGCACAGCT CCTGCCCGGC CTTCGGCGGC
CCAGACCTTG ACCAGCTCTT CATCACCACC GCCCGCGAAG GGCTCAGCGC CGACGACATC
GCCGCCGCTC CGGAAAACGG CTGCGTCTTT GCCGCCGAGG GGGTCGCACG CGGCCTGCCG
GAACCCCGGG TGATCCTGTG A
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| Protein sequence | MSATLYDDRP CALGEGPLWH PERQQLFWFD ITGQRMLSRD GDTPLEWQFD EMVSAAGWVD
HDTLLIASET ALVTFDLAEG ESRFVAPLEA DRPETRSNDG RADPWGGFWI GTMGKSAEPG
AGAIYRLFDG TLRRVVRDVT ISNALCFDAA QSCAYYADTP TRQVMRLPLD GDGWPSGPAT
VAVDLRAEGL NPDGAVTDAA GNLWIAQWGA GRVACHAPDG TFLRALACGG RHSSCPAFGG
PDLDQLFITT AREGLSADDI AAAPENGCVF AAEGVARGLP EPRVIL
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