| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1239 |
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| Symbol | lacZ |
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| ID | 5711797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1285260 |
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| End bp | 1287167 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641267151 |
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| Product | beta-galactosidase |
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| Protein accession | YP_001532582 |
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| Protein GI | 159043788 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1874] Beta-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.527812 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0426112 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGCGCA AGCTGGGCGT CTGCTACTAC CCCGAGCATT GGCCCGAAGA CCAATGGCCG
CGGGACGCCG CACGCATGAA GGACGCGGGC CTCACCCTCG TCCGGATCGG GGAATTCGCC
TGGTCCCGGC TCGAACCCTC CCCCGGCGAT CTGCGGTTCG ACTGGCTCGA CCGTGCCATT
TCCGTTCTGG CCGAGGCCGG GCTGGAGGTC GTTCTGGGCA CCCCCACCGC CACACCGCCG
CGCTGGATGC TCGACCGCCA CCCCGACATG CTGGCCGTGG ACGCCCGCGG CCAGCCGCGC
AAGTTCGGCT CCCGGCGGCA CTACTGCTTC AGCCATCCCG GCTACCGGGC CGAGGCCGCG
CGCATCGCCC GCCTGCTGGG GGAGCGGTAC GGCCGCGACC CCCGCATCGT GGCCTGGCAG
ATCGACAACG AATACGGCTG CCACGACACA ACGCTCAGCT ATTCCGACGC CGCCCGGCAT
GGGTTTCGCG ACTGGCTCGC CCAACGTTAT CAGTCCACCG ACGCGCTCAA CCGCGCCTGG
GGAAACGTGT TCTGGTCTAT GGCGTACGAC CGCTTCGACC AGATCGACCT GCCGAACCTG
ACCGTGACCG AGCCGAACCC GGCCCATGCG CTGGCCTTCC GGCGCTACGC ATCGGACATG
GTGGTGGCCT TCAACCGCGC GCAGGTCGCG GCCCTGCGCC CCCTGACGGA CGCACCGCTG
ATCCACAACT ACATGGGCCG GGTGACCGAG TTTGATCACC ACGCGGTGGG CGCGGACCTC
GATATCGCCA GTTGGGACAG CTACCCGATG GGCTTTTTGC TCGACCGGGT CGAAGCACCC
GCCGATCACA AGGCGGCCTA TCTCCGCCAG GGCGACCCGG ATTTCCAGGC CTTCCACCAC
GACCTCTATC GCGGGGTCGG ACGGGACGGC CGCTGGTGGA TCATGGAACA GCAACCCGGC
CCGGTGAACT GGGCGCCCTG GAACCCCGCC CCCCTGCCCG GCATGGTGCG GCTGTGGTCC
CACGAAGCCT TCGCCCACGG CGCCGAGGCG GTCTGCTTTT TCCGCTGGCG CCAGGCCCCC
TTCGCGCAGG AGCAGATGCA TGCGGGCCTT CTGCGCCCCG ACGACAGCCC GGCCCCAGGG
CTGGAGGAGG CCGCGGCCCT GGCCGCAGAC CTCCCCCGGC TTCCCGACGT GTCACCGAGC
CGCGCCCCCG TGGCGCTCGT GTTCGACTAC CCCTCCCAAT GGGCGTGGGA GGTGCAGCCC
CAGGGCGCGG ATTTCGACTA TTTCGCCCTG TGCTTTGCGA TGTATCGCGG GCTGCGCAAG
CTCGGCCTCT CGGTCGACAT CCTGCCCGCG GACCCGGCAC GGCTGGCGGG CCATGACCTG
ATCCTTGTTC CCGGGCTTTT GCACCTGTCA GCCGACATGA CCGCATATCT CGCAACGACC
CAGGCGCAGG TGCTGGTCGG CCCGCGCGCG GGTTCCAAGA CGCCGGAGAT GTCCATCGCC
CTGCCGCTCG GCCCCAATCT GCAAGGGCTC GACGCCACCG TGACCCATGT CGAAACCCTG
CCCCCCGGCG CCGAACGCGC GCTGCAACGC GGCGGGGCCG CCGAACGCTG GATCGAGGCC
GTCGAGACCC GCGCCGAGAT CCTGGAGGAA ACCACCGAAG GCGCCCCCGT CCTGATCCGC
ACCGGACGGC AACACTACCT CGCGGCCTGG CCGGACCCGG AGGCCATGGG CCGCATCCTG
CGCGATCTCT GCTCGCGCGC AGGCATCCAG ACCACCGACA TGCCCGAAGG CGTCCGCCAA
CGCGTCCACG GCCACCACAA GCTGGTGGTC AATTATTCCT CCGAAATGCG GGTTTTCGAA
AACGATGCCT TGCCCCCTGC GGGTCTGGTG TGGAAATTGA TCCCATGA
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| Protein sequence | MTRKLGVCYY PEHWPEDQWP RDAARMKDAG LTLVRIGEFA WSRLEPSPGD LRFDWLDRAI
SVLAEAGLEV VLGTPTATPP RWMLDRHPDM LAVDARGQPR KFGSRRHYCF SHPGYRAEAA
RIARLLGERY GRDPRIVAWQ IDNEYGCHDT TLSYSDAARH GFRDWLAQRY QSTDALNRAW
GNVFWSMAYD RFDQIDLPNL TVTEPNPAHA LAFRRYASDM VVAFNRAQVA ALRPLTDAPL
IHNYMGRVTE FDHHAVGADL DIASWDSYPM GFLLDRVEAP ADHKAAYLRQ GDPDFQAFHH
DLYRGVGRDG RWWIMEQQPG PVNWAPWNPA PLPGMVRLWS HEAFAHGAEA VCFFRWRQAP
FAQEQMHAGL LRPDDSPAPG LEEAAALAAD LPRLPDVSPS RAPVALVFDY PSQWAWEVQP
QGADFDYFAL CFAMYRGLRK LGLSVDILPA DPARLAGHDL ILVPGLLHLS ADMTAYLATT
QAQVLVGPRA GSKTPEMSIA LPLGPNLQGL DATVTHVETL PPGAERALQR GGAAERWIEA
VETRAEILEE TTEGAPVLIR TGRQHYLAAW PDPEAMGRIL RDLCSRAGIQ TTDMPEGVRQ
RVHGHHKLVV NYSSEMRVFE NDALPPAGLV WKLIP
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