| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1238 |
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| Symbol | dmsA2 |
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| ID | 5711796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1282492 |
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| End bp | 1285278 |
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| Gene Length | 2787 bp |
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| Protein Length | 928 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641267150 |
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| Product | molybdopterin oxidoreductase Fe4S4 region |
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| Protein accession | YP_001532581 |
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| Protein GI | 159043787 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.389489 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0809066 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAAATTG ATCCCATGAA AGACAGTGTC GCACCAGACA TCCCGACCCC GCGCTTCGAC
GAGATGCGAC AAACGACCTG CTACATGTGC GCCTGCCGCT GCGGGATCAA CGTTCACCTC
AAGGACGGCA AGGTCGCGTA TATCGAGGGC AATCGCGCCC ACCCTGTGAA CAAGGGCGTC
CTTTGCGCCA AGGGCTCCGC AGGCATCAAG CAGCACACCG CGCCCTCGCG CCTGCGCGCG
CCGATGAAGC GCGTCGGCCC GCGCGGCTCG GGCCAGTTCG AAGAGATCAC CTGGGACGAG
GCCCTGCAAT TGGCGGTCGA CTGGCTCGCG CCCTTGCGCG AGACGGCACC CGAGAAGCTC
GCCTTCTTCA CCGGGCGCGA CCAGTCCCAA AGCTTCACGA GCTTCTTCGC GCAGAATTTC
GGGACCCCGA ACTACGCCGC CCATGGCGGG TTCTGCTCCG TCAACATGGC AGCGGCCGGC
ATCTACACCA TGGGCGGGGC CTTCTGGGAA TTCGGCGCGC CGGATTGGGA GCATACCAGG
ATGTTCCTGC TCTTCGGCGT GGCCGAGGAC CATGACAGCA ACCCGATCAA GATCGGCCTC
GGCAAGCTGA AGGCCCGCGG TGCCAAGGTC GTCGGCATCA ATCCGATCCG CACCGGCTAC
AACGCGATTG CCGATGACTG GTACGGGATC ACACCGGGCA CGGACGGCCT CTTGATCCTG
TCGCTGATCC ACTGCCTGCT GCGCGCGGGC CGGATCGATC TCGACTACCT CGCGGCCTTC
ACCAACGCGC CTGTCCTGGT GAACGAGGAT CCCGCCAGCC CCGAAAAGGG TCTCCTGCTG
CGCGACGAGG CGGACAAGCT GCTGATCCTC GATCGCGCCA CGGGCAAGCC GGTGCCTTTC
GACACCCAGG GTGTGCAGCC CGATCTCGCG GGCTCCTATC GCCGCGCGGG CGTATCGCAC
CGCCCCGTGA TCCAGCACAT CGCCGAGAAG TACCTGAGCG ATGATTACGC GCCCGAGGCC
GTGGCCGACC GCTGCGGCAT CCCGGCCGCG CGCATCCGCA CGCTTGCCGC CGAGCTTGCC
CGGACCGCCT TCGACGAGGC CTTCGAACTC GATATCCCCT GGACCGATTT CCGCGGCAAC
AAGCACCAGA CCATGCAAGG CCGCCCGGTC TCGATGCACG CCATGCGGGG CATCTCCGCC
CATGCCAACG GGTTTCAGAC CGCCCGCGCG CTGCACCTGT TGCAGATCCT GCTGGGCACG
GTGGAGGTCC CCGGCGGCTT CCGCTTCAAG CCCCCCTACC CCAAACCGCC CGAGGCGCAT
CCCAAGCCCC ATTGCAAGGT CACCCCCGGC GCACCGCTCG ATGGCCCGCA TCTGGGCTTC
GTGCACGGCC CGGACGATCT GTGCCTGACC CCCGAGGGCG CGCCTGCCCG CATCGACAAG
GCGTTCTCCT GGGACAACCC CATGTCGGCC CACGGGCTGA TGCACATGGT GATCTCCAAC
GCCCATGCAG GCGATCCCTA CAAGATCGAC ACCCTGTTCA TGTACATGGC CAACATGGCC
TGGAACTCCT CCATGAACAC CGCCGAGACC ATGGCGATGC TCACCGACAC CGACGAGACC
GGCGCCTACA AGATCCCGCG CATCATCTAT GCCGATGCCT ACAAATCCGA GATGGTCGCC
TATGCCGACC TGATCCTGCC GGACACCACC TATCTCGAAC GCTACGACTG CATCTCGCTG
CTCGACCGTC CGATCTGCGA GCCGGACGCC GTGGCCGACG CGATCCGCTG GCCGGTGGTC
GAGCCTGATC GCGACGTGCG CGGGTTCCAG TCGGTGCTGG TGGATCTCGG CGCACGGCTG
GGTCTGCCCG GCTTCGTCGA TGCCGAGGGC GCGCCGCTTT ACGCCGATTA CGCCGATTAC
ATGGTCAAGC ACGAACGCCG CCCCGGCGTC GGCCCGCTCG CGGGCTTTCG CGACACCGGC
GAGGCGGCGG GCCGCGGCGC GCCGAACCCT GACCAGATCC AGCGCTACAT CGACAATGGC
GGCTTCTGGG AGGCCGAGGT GCCCAAAGAG GCCCGCTACT ACAAACCGTG GAACACCGCC
TACCAGGACT GGGCGGTCGA AATGGCCTTC TACGACGCGC CGCAACCCTA CATCTTCAAC
CTCTGGTCCG AACCCCTGCG CCGGTTCCAG CTCGCCGCCG AGGGCCATGG CGAACGCCAA
CCGCCCGACC ACTTGCGCGC GCAAATCCGC GAGAAGCTCT CGCCGCTCCC GATCTGGTAC
GAGAGCACCG ATGCCCGCGC GAACGAATTC CCCCTTCACG CCCTGACCCA GCGGCCCATG
GCGATGTACC ACTCCTGGGG CTCGCAAAAC GCCTGGCTGC GCCAGATCCA CGGGGTCAAC
CCGCTCTACG TGCCCTCCGC GGTCTGGGAG GAACACGGGT TTTCCGACGG CGACTGGGCC
ACGCTCATCT CACGCCACGG GGAGATCACC ATCCCCGTGG CCCTGATGGC CGCACTCAAC
CCGAAAACCG TCTGGACCTG GAATGCCATC GGCAAGCGCA AGGGCGCCTG GGGCCTCGAC
GCGGACGCGC CGGAGGCGAC CAGGGGCTTC CTGCTCAACC ACCTGATCTC CGAACTTCTG
CCCGCCCGCG CCGACGGGAT GCGCTGGTCG AACTCCGACC CCGTGACAGG ACAGGCCGCC
TGGTTCGACC TGCGCGTCAA CATCGCCAAG GCTCCGGCGC GCGCCGAGGC CGCACCCAGC
TTCCCCCCGG TCCACGGCCC CGCATGA
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| Protein sequence | MEIDPMKDSV APDIPTPRFD EMRQTTCYMC ACRCGINVHL KDGKVAYIEG NRAHPVNKGV
LCAKGSAGIK QHTAPSRLRA PMKRVGPRGS GQFEEITWDE ALQLAVDWLA PLRETAPEKL
AFFTGRDQSQ SFTSFFAQNF GTPNYAAHGG FCSVNMAAAG IYTMGGAFWE FGAPDWEHTR
MFLLFGVAED HDSNPIKIGL GKLKARGAKV VGINPIRTGY NAIADDWYGI TPGTDGLLIL
SLIHCLLRAG RIDLDYLAAF TNAPVLVNED PASPEKGLLL RDEADKLLIL DRATGKPVPF
DTQGVQPDLA GSYRRAGVSH RPVIQHIAEK YLSDDYAPEA VADRCGIPAA RIRTLAAELA
RTAFDEAFEL DIPWTDFRGN KHQTMQGRPV SMHAMRGISA HANGFQTARA LHLLQILLGT
VEVPGGFRFK PPYPKPPEAH PKPHCKVTPG APLDGPHLGF VHGPDDLCLT PEGAPARIDK
AFSWDNPMSA HGLMHMVISN AHAGDPYKID TLFMYMANMA WNSSMNTAET MAMLTDTDET
GAYKIPRIIY ADAYKSEMVA YADLILPDTT YLERYDCISL LDRPICEPDA VADAIRWPVV
EPDRDVRGFQ SVLVDLGARL GLPGFVDAEG APLYADYADY MVKHERRPGV GPLAGFRDTG
EAAGRGAPNP DQIQRYIDNG GFWEAEVPKE ARYYKPWNTA YQDWAVEMAF YDAPQPYIFN
LWSEPLRRFQ LAAEGHGERQ PPDHLRAQIR EKLSPLPIWY ESTDARANEF PLHALTQRPM
AMYHSWGSQN AWLRQIHGVN PLYVPSAVWE EHGFSDGDWA TLISRHGEIT IPVALMAALN
PKTVWTWNAI GKRKGAWGLD ADAPEATRGF LLNHLISELL PARADGMRWS NSDPVTGQAA
WFDLRVNIAK APARAEAAPS FPPVHGPA
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