| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1237 |
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| Symbol | dmsB |
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| ID | 5711795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1281663 |
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| End bp | 1282409 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641267149 |
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| Product | 4Fe-4S ferredoxin iron-sulfur binding domain protein |
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| Protein accession | YP_001532580 |
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| Protein GI | 159043786 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.85185 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0427162 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGCGT TGCCCAGCCA TACCGAGAAA AAGCTCGGCC TCGTCATCGA CCTCGACACC
TGCGTCGGCT GCCACGCCTG CGTCGTCGCC TGCAAGGGCT GGAACGACCA GGCCTATGGC
GCGCCGCTCA GCGATCAGGA CCCCTACGGC GCCGACCCCA CGGGCAGCTT TCTCAACCGC
GTCCACAGCT ACGAGGTCAC CCCCGCCTCC GGCCCCGCGC AACTCGTGCA TTTCCCGAAA
TCCTGCCTGC ATTGCGAGGA CGCGCCCTGC GTCACCGTCT GTCCCACCGG GGCCAGCTAT
AAACGCGCCG AGGACGGGAT CGTCCTGGTG AACGAGGACG CGTGTATCGG CTGCGGCCTA
TGTGCCTGGG CCTGCCCTTA CGGCGCCCGA GAAATGGACG CGGCCGCCGG CGTGATGAAG
AAATGCACCC TCTGCGTCGA CCGGATCTAC AACGAGGCCC TGCCCGAAGA AGACCGCCAA
CCGGCCTGCG TGCGCACTTG CCCCGCAGGC GCACGCCATT TCGGCGACCT GGGCGATCCC
GACAGCGAGG TCAGCCAACT CGTGGCCGCG CGCGGCGGTG TGGACCTGAT GCCCGAGCAA
GGCACCAAAC CCGTCAACAA GTACCTGCCG CCGCGCCCCA GGGACGAGGT GCCCGAGTTC
GACGTGCTCG CCCCCTATCT CGAGCCCGTC GCGACCGAGC CGCAGGGCTT TCTCGGCTGG
CTCGACCGCA CCCTCGATCG GATCTGA
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| Protein sequence | MTALPSHTEK KLGLVIDLDT CVGCHACVVA CKGWNDQAYG APLSDQDPYG ADPTGSFLNR
VHSYEVTPAS GPAQLVHFPK SCLHCEDAPC VTVCPTGASY KRAEDGIVLV NEDACIGCGL
CAWACPYGAR EMDAAAGVMK KCTLCVDRIY NEALPEEDRQ PACVRTCPAG ARHFGDLGDP
DSEVSQLVAA RGGVDLMPEQ GTKPVNKYLP PRPRDEVPEF DVLAPYLEPV ATEPQGFLGW
LDRTLDRI
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