Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1232 |
Symbol | |
ID | 5711790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 1275516 |
End bp | 1275992 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641267144 |
Product | isoprenylcysteine carboxyl methyltransferase family protein |
Protein accession | YP_001532575 |
Protein GI | 159043781 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2020] Putative protein-S-isoprenylcysteine methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.054338 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGAGC GGTTGAAGGA ACTCAGTCTG GAACAGGCGC TGGACATCCC GCCGCTGTGG CTGCTGATTT GCGTCCTGCT GGGCTGGGCG CAGGCGCGGT TCCTGCCGGT CGGGCCGCCA GGCGGGGCGA TCACGGATCT TCTGGGCGGT CTTCTGGTAG GGGGCGGTAT CCTGCTGATC CTGCTTGCGG TGCTGGAATT CCGCAAGCAT TCCACCACGA TAGTGCCCCA CCTGACCCCC GATACCCTGA TCACCGAGGG CATTTTCAGC CGGACGCGCA ATCCGATCTA CCTGGCGGAT GTGCTGATCC TGACGGGGCT GCTGCTGCGT TGGGAGGCGT GGCTGTCGCT GCCGCTGGCG GCGGTTCTGG TGCTGGTGCT GGAACGCCGT TTCGTGCGGG CCGAGGAGCA GCGGGCGCTG GAGACCTTCG GTCCGGCCTT CGAGGCCTAT TGCGCCCGCA CCCGTCGGTG GCTGTGA
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Protein sequence | MLERLKELSL EQALDIPPLW LLICVLLGWA QARFLPVGPP GGAITDLLGG LLVGGGILLI LLAVLEFRKH STTIVPHLTP DTLITEGIFS RTRNPIYLAD VLILTGLLLR WEAWLSLPLA AVLVLVLERR FVRAEEQRAL ETFGPAFEAY CARTRRWL
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