Gene Dshi_1232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1232 
Symbol 
ID5711790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1275516 
End bp1275992 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content66% 
IMG OID641267144 
Productisoprenylcysteine carboxyl methyltransferase family protein 
Protein accessionYP_001532575 
Protein GI159043781 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2020] Putative protein-S-isoprenylcysteine methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.054338 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGAGC GGTTGAAGGA ACTCAGTCTG GAACAGGCGC TGGACATCCC GCCGCTGTGG 
CTGCTGATTT GCGTCCTGCT GGGCTGGGCG CAGGCGCGGT TCCTGCCGGT CGGGCCGCCA
GGCGGGGCGA TCACGGATCT TCTGGGCGGT CTTCTGGTAG GGGGCGGTAT CCTGCTGATC
CTGCTTGCGG TGCTGGAATT CCGCAAGCAT TCCACCACGA TAGTGCCCCA CCTGACCCCC
GATACCCTGA TCACCGAGGG CATTTTCAGC CGGACGCGCA ATCCGATCTA CCTGGCGGAT
GTGCTGATCC TGACGGGGCT GCTGCTGCGT TGGGAGGCGT GGCTGTCGCT GCCGCTGGCG
GCGGTTCTGG TGCTGGTGCT GGAACGCCGT TTCGTGCGGG CCGAGGAGCA GCGGGCGCTG
GAGACCTTCG GTCCGGCCTT CGAGGCCTAT TGCGCCCGCA CCCGTCGGTG GCTGTGA
 
Protein sequence
MLERLKELSL EQALDIPPLW LLICVLLGWA QARFLPVGPP GGAITDLLGG LLVGGGILLI 
LLAVLEFRKH STTIVPHLTP DTLITEGIFS RTRNPIYLAD VLILTGLLLR WEAWLSLPLA
AVLVLVLERR FVRAEEQRAL ETFGPAFEAY CARTRRWL