Gene Dshi_1230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1230 
Symbol 
ID5711788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1273036 
End bp1274217 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content71% 
IMG OID641267142 
Productkynureninase 
Protein accessionYP_001532573 
Protein GI159043779 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3844] Kynureninase 
TIGRFAM ID[TIGR01814] kynureninase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0974944 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGAC GCGACGCATT CGATCTGCCC GAGGGCGTGA TCTATCTCGA CGGCAACTCG 
CTCGGCCCCC TGCCGCGCAG GGCAGAGGCC GCTGTGGCTC GGGCAATGCA GGCGGAATGG
GGCGCGATGC TGATCCGCGG CTGGAACGAG GCGGGCTGGA TGGATCAGCC CGACCGGCTC
GGCGACCGGA TCGCGCCACT GATCGGCGCG GCGCCCGGCA CGGTGACCGT GGGCGAAACG
CTGTCCATCC GCGTGTTCCA GGGCCTGGCC GCCGCGCTCT CTTTGCGGCC CGGGCGCAAG
GTGATCCTGA CCGAGGCCGG GAACTTCCCC TCCGATCTCT ACATGGCCCA GGGCCTGATC
GACGCGCTCG GCCAAGGTCA CGTTCTGCGC GCCCTGCCCG CAACCGAGAT CCCCGCCGCC
CTGACCGACG AGGTGGCGGT GCTGATGCTG ACCGAGGTCG ATTACCGCAG CGGCGCGCGC
CACGACATGG CCGCGCTTAC CGCCCAGGCC CACGGGGTCG GCGCGCTGAC CCTGTGGGAT
CTCGCCCATT CCGCCGGTGC CCTGCCCGTG GCGCTGACAC GCTGCAACGC GGATTTCGCC
GCGGGCTGCA CCTACAAGTA CCTCAATGGC GGGCCCGGGG CGCCCGCGTT CTTCTACGCC
CGCCCCGATC ATTCTGAAAT CACCCGCCCG ATCCTCGCAG GCTGGCTCGG CCACGCCGCG
CCCTTCGACT TCGCGCCGGA CTATGCCCCC GGCCCCGGAC GCGCCCGGTT CCGCATCGGC
ACCCCGCCGG TTCTGCAAAT GGCCGCGCTC GACGCCGCGC TCGACATCTT CGACGGGGTG
GATATCGCGG CCCTGCATGC CCGCGCCATT GTCCTGGCCG ACCGGCTGGC CACGGGGTTC
GAGGCCGTCT GCCCCGATCT GCGCCGCCTC ACCCCGATGG ACCCCGCGCG GCGCGGCAGC
CAGATCGCCT TCGCCCACCC GAACGGCTAC GCCATGGTGC AGGCGCTGAT CGCCCAAGGG
GTTATCGGGG ATTTTCGCGC GCCGGACATC CTGCGCTTCG GCCTCACGCC GCTCTACCTG
GATGCGGGCG ACATCGACAC GGCCATCGAG CGCTTCGCAC AGGTGATCGA GGGGCGGCTC
TGGGACGATC CCGCCTACCG CACCCGCAAC AAGGTGACCT AG
 
Protein sequence
MLRRDAFDLP EGVIYLDGNS LGPLPRRAEA AVARAMQAEW GAMLIRGWNE AGWMDQPDRL 
GDRIAPLIGA APGTVTVGET LSIRVFQGLA AALSLRPGRK VILTEAGNFP SDLYMAQGLI
DALGQGHVLR ALPATEIPAA LTDEVAVLML TEVDYRSGAR HDMAALTAQA HGVGALTLWD
LAHSAGALPV ALTRCNADFA AGCTYKYLNG GPGAPAFFYA RPDHSEITRP ILAGWLGHAA
PFDFAPDYAP GPGRARFRIG TPPVLQMAAL DAALDIFDGV DIAALHARAI VLADRLATGF
EAVCPDLRRL TPMDPARRGS QIAFAHPNGY AMVQALIAQG VIGDFRAPDI LRFGLTPLYL
DAGDIDTAIE RFAQVIEGRL WDDPAYRTRN KVT