Gene Dshi_1226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1226 
Symbol 
ID5711784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1269139 
End bp1269306 
Gene Length168 bp 
Protein Length55 aa 
Translation table11 
GC content62% 
IMG OID641267138 
Producthypothetical protein 
Protein accessionYP_001532569 
Protein GI159043775 
COG category[S] Function unknown 
COG ID[COG4338] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.231582 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAGA AATCCGACCT GCCGACCAAG ACGTGTGTTT CTTGCGGTTT GCCCTTCGCC 
TGGCGCAAGA AATGGGCGCG GGATTGGGAG GCCGTGAAAT ATTGCTCCGA CCGCTGCCGC
CGGGCCGGGG CCGCCCCGGT TTCAGGCAAG GCGCAATCCA AACCGTAA
 
Protein sequence
MRKKSDLPTK TCVSCGLPFA WRKKWARDWE AVKYCSDRCR RAGAAPVSGK AQSKP