| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1223 |
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| Symbol | pepN |
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| ID | 5711781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1264297 |
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| End bp | 1266852 |
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| Gene Length | 2556 bp |
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| Protein Length | 851 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641267135 |
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| Product | aminopeptidase N |
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| Protein accession | YP_001532566 |
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| Protein GI | 159043772 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0308] Aminopeptidase N |
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| TIGRFAM ID | [TIGR02414] aminopeptidase N, Escherichia coli type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.336507 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGACG CTGCCCCCCA GACCATCCGC CTTGCCGACT ACACCCCCTA CCCGTTCCGC
ATCGACCATG TGGAGCTGAT CTTCAGCCTC GCCCCCACGG CAACCCGGGT ACTCTCGACG
CTCAAGGTGA CACCCCTGCA ACCGGGCACG GACATGCGGC TCGACGGCGA GGACCTGCTG
CTGATCCGCG CGGCGATCGA CGGCGCGCCG GTCTCCGTGA CCCCCGACGC CACGGGCCTG
ACCGTGCCCG CCGCCCTGCT GCCCGATGGC CCCTTCACCT GGGAATGCGA GGTCCAGATC
GCGCCGGCCG AGAACACCGC CCTCGAAGGC CTCTACATGT CCAAGGGCAT GTATTGCACC
CAGTGCGAGG CCGAGGGCTT CCGCAAGATC ACCTACTATC CCGACCGCCC GGACGTCATG
GCCCCCTTCG ACGTGCGCAT CCTGGCGGCC GAGGACGGCT CCACCCCGGT GCTGCTGTCC
AACGGCAACC CCACCGGCCA CGGCCGCTGG ACCGACCCCT GGCCCAAACC CGCCTACCTG
TTTGCCCTGG TGGCCGGCGA CCTCGTGTCG GTGGACGACA GCTTCACCAC CCGGTCGGGC
CGCGACATCG CGCTCAGGAT CTGGGTCCGC CCAGGCGACG AGGGCAAATG CGCCTACGCC
ATGGATGCGC TCAAACGCTC CATGCGCTGG GACGAAACCG AATACGGCCG CGAATACGAC
CTCGACATCT TCCAGATCGT CGCCGTGGAC GACTTCAACA TGGGCGCGAT GGAGAACAAG
GGGCTGAACA TCTTCAACTC CAAATATGTG CTCGCCTCGC CCGAGACCGC CACCGACCGC
GACTACGAGC TGATCGAGGG CATCATCGCG CATGAATACT TCCACAACTG GACCGGCAAC
CGCATCACCT GCCGCGACTG GTTCCAGCTC TGCCTCAAGG AAGGGCTGAC CGTCTTCCGG
GACCAGCAGT TCTCCGGCGA CATGCGCTCC CACGCGGTCA AGCGGATCGA CGACGTGCTG
ATGCTGCGCG CCCGCCAGTT CCGCGAGGAT GCAGGCCCGC TGGCCCACCC CGTGCGCCCC
GAGGAATATA TCGAGATCAA CAACTTCTAC ACCGCCACGG TCTACGAAAA AGGAGCCGAG
GTGATCGGCA TGCTGCGCAC TCTCATCGGG CCGGAGGCGT ATCGCAAAGG CTGCGACCTC
TATTTCGACC GCCACGATGG GCAGGCCTGC ACGATCGAGG ACTGGATCGC GGTGTTCGAG
GACGCCACGG GGCGCGACCT GAGCCAGTTC AAGCTGTGGT ATTCCCAGGC CGGAACTCCG
CGCCTCGACG TGGCCGAGGC CTTCTCGGAC GGCACCTACA CCCTCACCCT GCGGCAAGAA
ACCCCCGATA CCCCCGGCCA GACCGACAAG GCGCCCCAGG TGATCCCGGT CACGGTCGGG
CTGCTGGGAC GCGACGGGCG CGAACGCGCC CCCTCCACCA CGCTGGAGCT GACCGAGCGC
ACCCAATCCT TCCGCTTCGA CGATCTGCCG GAGCGGCCCG TCCCGTCCCT CCTGCGCGGC
TTCTCCGCCC CGGTGATCCT GCGCCACGAG GTCAGCCGCG ACGACCAGCT CCTGCTGCTG
GCCCATGACA CCGACCCGTT CAACAAATGG GAGGCCGGGC GCAGCCTGGC CAAATCCACC
CTGATCGCCA TGGTAACCGA GGACACCGCG CCCTCCGAGG CCTTCCTCGA TGCGCTCACC
ACCGTGGCCG GAGACGGCAG CCTCGATCCC GCCTTCCGGG CGCTGGCCCT GGCGCTGCCG
TCCGAAGACG ATCTCGCCCA GACCCTCCAT GCCAGCGGCG TGACCCCGGA CCCCGACGCG
ATCCACGCCG CGCGCCAATC CCTGACCCGC GCCTTCGCCG CCCATGCCGA GCCGACCCTG
TCGGCGCTCT ACGACACCAT GGCCGTGCCC GGCCCCTATA CCCCCGACGC CAAGGCCGCG
GGCCGACGCG CCCTGCGCGG CACCGCCCTG CGCCTGCTGT CCGAGCGCGA CAATGGCGAC
CGGGCACGGG CGCAGTTCCT GTCGGCCGAC AACATGACCG AACAGCTGGC AGCCTTCTCG
GCGCTTTTGA TCATCGGCCA GGGCAGCGCC GCCGTGGGCA CCTTCTACGA GCAGTGGCAC
GAGGACCGGC TGGTGATGGA CAAGTGGTTC GCGCTACAGG TGTCTCTCGC CCCGCCCGAG
AAAGCCGTGC GCGCCTGCAA GGCGCTCGCG GCGCATGCGG ATTTCGACTG GAAGAACCCC
AATCGTTTTC GCAGCACCCT CGGCGCGCTG ACCATGAACG CCGCCGGGTT CCACAATCCC
AGCGGCGAGG GCTATGAGTT GCTGGCGGAC TGGCTGATCC GGCTCGACCC GGTCAACCCG
CAGACCGCCG CGCGCATGAC CACCGCCTTC GACAGCTGGC GGCGCTACGA CACCAACCGC
CAACGGCTGA TCAAGATGGA GCTGGAGCGT ATTGCAGCGA CCCCGGGGCT CTCCCGGGAC
GTGACCGAAA TGGTCGGCCG CATCCTCGCG GCCTGA
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| Protein sequence | MRDAAPQTIR LADYTPYPFR IDHVELIFSL APTATRVLST LKVTPLQPGT DMRLDGEDLL
LIRAAIDGAP VSVTPDATGL TVPAALLPDG PFTWECEVQI APAENTALEG LYMSKGMYCT
QCEAEGFRKI TYYPDRPDVM APFDVRILAA EDGSTPVLLS NGNPTGHGRW TDPWPKPAYL
FALVAGDLVS VDDSFTTRSG RDIALRIWVR PGDEGKCAYA MDALKRSMRW DETEYGREYD
LDIFQIVAVD DFNMGAMENK GLNIFNSKYV LASPETATDR DYELIEGIIA HEYFHNWTGN
RITCRDWFQL CLKEGLTVFR DQQFSGDMRS HAVKRIDDVL MLRARQFRED AGPLAHPVRP
EEYIEINNFY TATVYEKGAE VIGMLRTLIG PEAYRKGCDL YFDRHDGQAC TIEDWIAVFE
DATGRDLSQF KLWYSQAGTP RLDVAEAFSD GTYTLTLRQE TPDTPGQTDK APQVIPVTVG
LLGRDGRERA PSTTLELTER TQSFRFDDLP ERPVPSLLRG FSAPVILRHE VSRDDQLLLL
AHDTDPFNKW EAGRSLAKST LIAMVTEDTA PSEAFLDALT TVAGDGSLDP AFRALALALP
SEDDLAQTLH ASGVTPDPDA IHAARQSLTR AFAAHAEPTL SALYDTMAVP GPYTPDAKAA
GRRALRGTAL RLLSERDNGD RARAQFLSAD NMTEQLAAFS ALLIIGQGSA AVGTFYEQWH
EDRLVMDKWF ALQVSLAPPE KAVRACKALA AHADFDWKNP NRFRSTLGAL TMNAAGFHNP
SGEGYELLAD WLIRLDPVNP QTAARMTTAF DSWRRYDTNR QRLIKMELER IAATPGLSRD
VTEMVGRILA A
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