Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1214 |
Symbol | coxE |
ID | 5711772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 1253734 |
End bp | 1254912 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641267126 |
Product | VWA containing CoxE family protein |
Protein accession | YP_001532557 |
Protein GI | 159043763 |
COG category | [R] General function prediction only |
COG ID | [COG3552] Protein containing von Willebrand factor type A (vWA) domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCCGTG CGACCCGCTT TGCCGCCCGC GATGCCGGGC CCGCCGCGCG CATGGCCGGG TTCATGGCCC ATCTGCGGTC CCATGGCCTG AGCCTCGGCG TCGGGGCCAC CGAGTTGGGG ATGGAGGCGC TGGCTTGCGT CGACTGCACC CGCCCGGACA CGGCCCGCGC GGCCCTGCGC GCAGTCTGCG CGGGCAGCCA GGCCGAAGCC GCGCAGTTCG ACGCCCTCTT CGATGCCTAT TGGCTCAATG GCGGGCGCGT GCGCACCAGG GCTGTCCCGA GCCCGGCGGT CCCGACGCCC GAGAACAGCT CGTCCGAGCT GGCCGAGGGC GCCTCTCAGG GCGGGCGCGG ACAGGCCGAA AGCCCCGATG GGGGCGACGG CGAGGCGGGC GCGGATGGCG AGGGCAAGCT CGTCGCCTAC GCCGTGGCGA ACCTGATGAA GAAAGACCTG CGCGACGTGG TCTCGGCCGC CGATATCCGC GCCGCCGAGA AGGTGGCCGA AAGTCTGGGC CGGGCCCTGC GCGACCGCCG CTCCCGCCGC CGCAAGGCCG CCGCGAAGGG GCAGGGGGTC GACATGCGCC GCACCCTGCG CCGGGCCCTG GCCACCGGGG GCGAGCCCCT GCGGCTGGCG CGCCGCCACC GCCCCGACCG GCCAGTGAAG ATCGTGGCAC TTTGCGATGT CTCCGGCTCC ATGACCCTCT ATGCCCGCGT GTTCCTCGCC TTCCTTGCGG GGCTGATGCG GGCCGATCCG GCCTCGGATG CGTATCTCTT TCACACGCGG CTCGTGCGCA TCACCCAGGC CCTGCGCGAT GACGACCCGA TCCGGGCGCT CAACCGGCTG AGCCTGCTTG CGGACGGGTT CGGGGGCGGC TCGAAAATCG GCGCGGCGCT GGAGCAGTTC GCCGCCACCT ATGCCCGCCG CTTCGTCGAC GGGCGCACGG TGGTGCTGAT CCTGTCGGAT GGCTACGACA CCGCCGAGGC GGGCGATACC GGGGCGGCCC TGGCCCGGCT GAAAAAACGG GGGTGCAAGG TGATCTGGCT CAACCCGCTG AAATCATGGA AAGACTACGC ACCGGTGGCG GGTGCGATGG CGGCGGCGAT GCCCCATCTC GACCTGTTCC ACCCGGCCGC GACCTTGGCG GATCTCGCCG CACTGGAAAC CGAATTGGGA GGGGTGTGA
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Protein sequence | MSRATRFAAR DAGPAARMAG FMAHLRSHGL SLGVGATELG MEALACVDCT RPDTARAALR AVCAGSQAEA AQFDALFDAY WLNGGRVRTR AVPSPAVPTP ENSSSELAEG ASQGGRGQAE SPDGGDGEAG ADGEGKLVAY AVANLMKKDL RDVVSAADIR AAEKVAESLG RALRDRRSRR RKAAAKGQGV DMRRTLRRAL ATGGEPLRLA RRHRPDRPVK IVALCDVSGS MTLYARVFLA FLAGLMRADP ASDAYLFHTR LVRITQALRD DDPIRALNRL SLLADGFGGG SKIGAALEQF AATYARRFVD GRTVVLILSD GYDTAEAGDT GAALARLKKR GCKVIWLNPL KSWKDYAPVA GAMAAAMPHL DLFHPAATLA DLAALETELG GV
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