| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1197 |
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| Symbol | dctB |
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| ID | 5711965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1237047 |
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| End bp | 1238915 |
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| Gene Length | 1869 bp |
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| Protein Length | 622 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641267108 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001532540 |
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| Protein GI | 159043746 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.534155 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACG CGCTCGCCCC TCCCCCCGCC GCCTCGCCCC GGCTGATCCC CGCCCTGGCG
GTGGCGGTGC TGCTCTCCGG ACTCGTGGCA GTGGCGGCCT TTCCGCGGAT CGAACGGTAT
TTCCTGACCG AGGCCGCCGA GAGGGCCGCG GCCACGCTCA GCCTGACGGT GGAGGGGCTG
AACGGCGCCC TGCGCCGCTA CGCCCCCCTG CCCGCGCTGG TGGCCGAGCG GCCCGACCTC
GCGGCCCTGC TGCGCCAGCC CGAGAACACC GCCCTGCAGG CCCGGATCAA CGAGGATCTG
CGCCAGACCG CCTATGCGAT CGGGGCCTCG GACGTGTACC TGATGGACAT TTCCGGGCTG
ACCCTGGCGG CCAGCAGCTA TCGCAAAACA CTGTCCTTCG TGGGCCGCAG CTTCAGTTAC
CGGCCCTATT TCACCCAGGC GCTGGATGGT GGGCTGGGCC GGTATTTCGC CCTTGGCACC
ACCTCCGGTG AGCGCGGCTA TTTCTACGCC GCCCCGGTCG AAGACAACGC GCGCATCACC
GGCGTGGTGG CTGTGAAATT CACCGTGGAC GGGTTCGAGG AAACCTGGCG CGCAGGCCCC
GCCACGGTTT TGGTGCGCGA CCTGCAGGGC GTGGTCTTCA TGTCCTCGCG CCCGGACTGG
CATTTCCGCG CGCTCGCCCC CCTGACCGAC GCCGCGCGCG CCCGGATCGA AGCCGCGCGG
CAGTATCCGC TGTCAGAGGT CACGCACCTG CCCACCGAGA TCACGCCCCT GTCGGAGGGC
GCGGAGCTGT GGTCCATCGC CACGCCCAGG GGCGAGGCCG AAAGCTATGT CGCCCGCACC
GCCCGGATCA GCGACGCGGG CTGGGACGTG ACGATCCTGC TGCCCACGGC GCCCGCGCGC
CAGCAGGCGC TGCAGATGAT GGCCATCGCC ATGCTGCTGA CCCTGCTGTT GGTGATGGCC
GCCGCGATCT ACCAGCAGCG CCGCGCCCGC CTGCTGGAGC GGATGGAGAC CCAGCGCGCC
GCCCAGGCCG AATTGGAGGC CCGCGTCACA CAGCGCACCG CGGATCTGAA CCTGGCCAAC
CGGCAGCTGC AGCAGGAGGT GGTCGAGCGC CGCCAGACCG AGCAGCGCCT GCGCAAGACG
CAAGCCGAGT TGGTGCAGGC CGGCAAGCTC GCCGCCCTGG GGCAGATGTC GGCGGCCCTC
AGCCACGAGT TCAACCAGCC GCTGGCGGCG GTGAAGTCCT ATGCCGAGAA TGCCATGACC
TTCCTCGACC GCGACCGGGT GCCCGAGGCG CGCGAGAACG TCACGCGGAT CTCGGCCATG
ACCGACCGGA TGGCGTCGAT CTCCAAGCAC CTGCGCAACT TCGCCCGCCG CCCGCAGGAA
GAGGTGGGCG CGGTGCGGCT CGACGCGGTG ATCGAGGACG CGCTGTCGGT GATGCAGGTC
CGGCTGAAGC AGACCGGCGC GGCGGTGGAC TACACCCCGC CAGAGGGGCC CGTCTGGGTG
CGCGGCGGCC ATGTGCGGCT GCAACAGGTG GTGGTCAACC TGCTCAGCAA CGCGCTGGAT
GCGATGACCC ACACACCTGC GCCCCGCGTC ACCCTGCGGA TAATCGCGCG CGACGGGGCC
CATATGCTCG AAGTCCGTGA CATCGGCCCC GGCATCGCGC CCGAAGCCGC CGAGACCATG
TTCGATCCGT TCTTCACCAC CAAGGCGCCG GGGGGCGGGC TCGGGCTGGG GCTGTCGATC
TCCTACAATA TCGTGCGCGA CTTCGACGGC ACGCTGGAGG CCGAGAATGC CCCCGGGGGC
GGTGCGGTCT TCCGGTTGGT CCTGCCCGCC GCGGCCGCCT CCCGCGCCGC CGGGACCGCG
GCGGGATGA
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| Protein sequence | MSDALAPPPA ASPRLIPALA VAVLLSGLVA VAAFPRIERY FLTEAAERAA ATLSLTVEGL
NGALRRYAPL PALVAERPDL AALLRQPENT ALQARINEDL RQTAYAIGAS DVYLMDISGL
TLAASSYRKT LSFVGRSFSY RPYFTQALDG GLGRYFALGT TSGERGYFYA APVEDNARIT
GVVAVKFTVD GFEETWRAGP ATVLVRDLQG VVFMSSRPDW HFRALAPLTD AARARIEAAR
QYPLSEVTHL PTEITPLSEG AELWSIATPR GEAESYVART ARISDAGWDV TILLPTAPAR
QQALQMMAIA MLLTLLLVMA AAIYQQRRAR LLERMETQRA AQAELEARVT QRTADLNLAN
RQLQQEVVER RQTEQRLRKT QAELVQAGKL AALGQMSAAL SHEFNQPLAA VKSYAENAMT
FLDRDRVPEA RENVTRISAM TDRMASISKH LRNFARRPQE EVGAVRLDAV IEDALSVMQV
RLKQTGAAVD YTPPEGPVWV RGGHVRLQQV VVNLLSNALD AMTHTPAPRV TLRIIARDGA
HMLEVRDIGP GIAPEAAETM FDPFFTTKAP GGGLGLGLSI SYNIVRDFDG TLEAENAPGG
GAVFRLVLPA AAASRAAGTA AG
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