| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1189 |
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| Symbol | |
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| ID | 5711957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1226167 |
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| End bp | 1227264 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641267100 |
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| Product | permease YjgP/YjgQ family protein |
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| Protein accession | YP_001532532 |
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| Protein GI | 159043738 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0795] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.216183 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.433432 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTGC AATGGTATTT CGCGCGCCGC TTCGTGATGA GCTTTCTGTC GATGCTGGGG
ATCTTCGCCG GGCTGATCTG GATGACCGAC ACGGTCGAAT CCCTGCGCAG CCTGTCGAGC
GACGATTTCG GGTTGCAGGA GGCCGCGGCG CTGGCGCTGC TGCAACTGCC GGCCACGATC
TACGAGGTCA TCCCGCTGAT CATGGTGCTG GCCACGATCA CCCTGTTTCT GAAGATGGCG
CGCACCTCCG AGCTGATCGT GACCCGCGCG GCGGGGCGCT CGGCCATCCG CAGCCTGATC
GCGCCGGTGA TCGTGGCCGG GCTGATCGGC GGGATCGGAA TCAGCGTGCT CAACCCCATC
GTCGCCGCCA CCTCGCGGAT CGCGGAGGAA ACCCGCGACG AGGTGCGGGG CCGCGCAACC
AGTGTGCTGG CGCTCAGCAG CGAGGGGCTG TGGCTGCGCC AGGCCGCCCC CGAGGGACAG
ATCGTGATCC ACGCGGCCGG GGCGAGCCTG GGGGGCACGA TCCTTTATGA CGTCACCTTC
CTGCGGTTCG ATGCAGATGC CCTTCCGATC GAGCGGGTGG CGGCCAGCCG GGCGGAGCTG
GTGCCCGGCG CCTGGGATCT GACCGGGGTC AAGGTCTGGG ATCTGACCGG GCGGCTGAAC
CCCGAGGCAG GCGTCCGGAC GAGCGCGTGG ATGCAGGTGC CCTCGGACCT GACCCTCGAC
CAGATCCGCG ACAGTTTCGG AGACCCCTCG GCCATTCCGA TCTGGGAGCT GCCCGCCTTC
ATCGACCAGC TTGAGGCGGC AGGTTTCGCA GCGCTCAGTC ACCGGGTCTG GCTGCATACG
GAGCTGGCCT CCCCGGTCTT TCTGGTCGCG ATGGTGCTGA TCGGGGCGGC GTTCACCATG
CGGCACACGC GGTTCGGGCG CACGGGGTTG ATGGTGCTTT TCGCGGTGCT GCTGGGGTTC
TCGATGTATT TTCTGAAGAG CTTCGCGCAG GTCCTTGGCG AGGCTGGAAA AATCCCGGTT
CTGGCTGCCG CGTGGTTTCC GCCGCTCGCG GGGGTGTTCC TGTCTCTGGC CTTGCTGCTG
CACCAGGAGG ACGGATGA
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| Protein sequence | MTLQWYFARR FVMSFLSMLG IFAGLIWMTD TVESLRSLSS DDFGLQEAAA LALLQLPATI
YEVIPLIMVL ATITLFLKMA RTSELIVTRA AGRSAIRSLI APVIVAGLIG GIGISVLNPI
VAATSRIAEE TRDEVRGRAT SVLALSSEGL WLRQAAPEGQ IVIHAAGASL GGTILYDVTF
LRFDADALPI ERVAASRAEL VPGAWDLTGV KVWDLTGRLN PEAGVRTSAW MQVPSDLTLD
QIRDSFGDPS AIPIWELPAF IDQLEAAGFA ALSHRVWLHT ELASPVFLVA MVLIGAAFTM
RHTRFGRTGL MVLFAVLLGF SMYFLKSFAQ VLGEAGKIPV LAAAWFPPLA GVFLSLALLL
HQEDG
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