| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1181 |
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| Symbol | |
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| ID | 5711949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1215344 |
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| End bp | 1216738 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641267092 |
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| Product | hypothetical protein |
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| Protein accession | YP_001532524 |
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| Protein GI | 159043730 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.415586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.738577 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGATA CGACCGCCCC CGCCGCCCTT GACCCGGTTC TGGACCATAT CGACGCTACG
TTACCCGAGG CGCTCGATCG GCTGATGGCG CTGCTGCGCA TCCCGTCGAT CTCCACCGAT
CCGGCCTATG CGCCGGACTG CGCGCGGGCC GCCGATTGGC TGGTGGCGGA GTTGCGCGCG
CTCGGGGCCG AGGCCGCGGC CCACCCCACG CCGGGCCATC CCATGGTGGT GGGGCACCTG
CCGGGGCGCG GGCCACGGGT TCTGTTTTAC GGCCATTACG ACGTGCAGCC GGTCGATCCG
CTGGATCTGT GGCATCGCCC ACCGTTCGAG CCGGAGGTGC AGGACACAAC CGCGGGCCGG
GTCATTCGCG GGCGCGGGGC TTGCGACGAC AAGGGGCAGC TGATGACCTT CCTGACCGCG
TGCCGGGCCT GGAAGGCGGT GAACGGGCCT CTGCCCATGG AGGTGGTGTT TTTCTTCGAA
GGCGAGGAGG AGAGCGGCTC GCCCTCCCTG ATCCCCTTCC TGGAGGCGCA TCGCGAGATG
CTGGGGGCGG AGCTGGCGCT GATCTGCGAC ACGGGGCTGT TCGATGATCG GGCGCCCGCG
ATCATCACCT CGCTGCGCGG GCTGGCGGGG ATCGAGGTGA CGCTGACCGG CGCGGACCGG
GACCTGCATT CGGGCGGCTT CGGCGGGCCG GCGGCGAACC CGATCCGGGT GCTGTCCAAG
GTCCTGGCGG GGCTGCATGA CGACACCGGC CGCGTGACAC TGCCGGGGTT CTACGCGGGC
GTGCCGGAGG TGACGGCGGA CCAGCTCGCC TCCTGGGACG CGCTGGGGTT CGATGCGGAG
GGGTTCCTGC GCTCTGTCGG GCTGTCGCGT CCGGCGGGCG AGGACGGGCG CCGGGTGCTG
GAGATGCTGT GGTCGCGGCC CACTTGCGAG ATCAACGGGA TTACGGGGGG CTATACGGGC
GCGGGGTTCA AGACCGTGCT GCCGAGCCAG GCCAGCGCCA AGATCAGCTT CCGGCTGGTG
GGCGATCAGG ACCCCGATGC GATCCTCGCT GCCCTGCGGG CCTATGTGGA GGCCAGCGTG
CCGGAGGACG TGGATGTCAC GTTCGAGGAT TTCGGCGCGG CCCCGGCCTC GGTCATGAAT
ACCGCGCACC CGGCCTTCGC AGCGGCGCGC GCCGCGCTCA GCGATGAGTG GGGGATGGAC
GCGGCGTTCA CCGGCGCGGG CGGGTCGATC CCCGTGGCGG GGTATTTCCA GTCGATCCTG
GGGATGGATT CGATGCTGAT CGGGTTCGGC AAGACCGATG ACGGCATCCA TTCGCCCAAC
GAGAAATACG ACGTGGAGAG CTTCCGGAAG GGCGCGCGCA GCTGGGCGCG GATCTTCGAC
AGGTTGCGGG GGTGA
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| Protein sequence | MPDTTAPAAL DPVLDHIDAT LPEALDRLMA LLRIPSISTD PAYAPDCARA ADWLVAELRA
LGAEAAAHPT PGHPMVVGHL PGRGPRVLFY GHYDVQPVDP LDLWHRPPFE PEVQDTTAGR
VIRGRGACDD KGQLMTFLTA CRAWKAVNGP LPMEVVFFFE GEEESGSPSL IPFLEAHREM
LGAELALICD TGLFDDRAPA IITSLRGLAG IEVTLTGADR DLHSGGFGGP AANPIRVLSK
VLAGLHDDTG RVTLPGFYAG VPEVTADQLA SWDALGFDAE GFLRSVGLSR PAGEDGRRVL
EMLWSRPTCE INGITGGYTG AGFKTVLPSQ ASAKISFRLV GDQDPDAILA ALRAYVEASV
PEDVDVTFED FGAAPASVMN TAHPAFAAAR AALSDEWGMD AAFTGAGGSI PVAGYFQSIL
GMDSMLIGFG KTDDGIHSPN EKYDVESFRK GARSWARIFD RLRG
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