| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1175 |
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| Symbol | |
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| ID | 5711943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1207399 |
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| End bp | 1207956 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641267086 |
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| Product | protein of unknown function DUF583 |
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| Protein accession | YP_001532518 |
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| Protein GI | 159043724 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1664] Integral membrane protein CcmA involved in cell shape determination |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0118209 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.643318 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCTCTA AATCCCGAAT CAACGAGCCC GGACCCAAGG CCGGAGACGA CGCGACAGAG
GCGAATGCCG CCCCCGCAGC CCCGCGCGGT GCCGCCGCCG ACAGCAAGCC CGTGGCCTCG
GCCAAGCCGA AACCGGCGCC GTCGCTTCTT TCGTCCGACC TGAAGATCGT GGGCAACCTG
CGCACCTCGG GCGACATCCA GATCGAAGGG CAGGTCGAGG GCGACATCCA TGCGCATCTG
CTGACAGTGG GCGAAGGAGC GACCGTGAAC GGTGAAGTGG TTGCTGACGA CGTGATCGTG
AATGGTCGGG TCATCGGGCG TGTGCGTGGG CTGAAGGTGC GTCTGACCTC CACCGCGCGG
GTCGAGGGCG ACATCATCCA CAAGACCATC GCGATCGAGA GCGGCGCGCA TTTCGAAGGC
TCCGTGCAAC GCCAGGACGA CCCTCTGGGC GGTGGCGGCA AGCCCAGGCA AGCTTCGCAG
GGCGAGGCGC CGCTGGGGAA CCAGCAGCCC GCGCCGCAGA AAGCGCCGCA ACCGGCCGCC
AAGCCCGCGC AGGGCTGA
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| Protein sequence | MFSKSRINEP GPKAGDDATE ANAAPAAPRG AAADSKPVAS AKPKPAPSLL SSDLKIVGNL
RTSGDIQIEG QVEGDIHAHL LTVGEGATVN GEVVADDVIV NGRVIGRVRG LKVRLTSTAR
VEGDIIHKTI AIESGAHFEG SVQRQDDPLG GGGKPRQASQ GEAPLGNQQP APQKAPQPAA
KPAQG
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