| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1168 |
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| Symbol | |
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| ID | 5711936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1198126 |
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| End bp | 1199301 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641267079 |
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| Product | aminotransferase class I and II |
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| Protein accession | YP_001532511 |
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| Protein GI | 159043717 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.010344 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.842384 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAACT CAAGCCGATC CGAGGTCGAT CCTTTTATCG TGATGGACGT GATGGAGGCC
GCGCGCCGGG CCGAGGCGGC AGGGCGGCAC ATCATCCACA TGGAGGTCGG CCAACCCGGC
ACCGCCGCCC CACTGCCCGC GCGTCGGGCG GTGGCGGCGC AGCTGGATCA GGACGCCATG
GGCTACACCG TTGCCTTGGG CCTGCCGGAA CTGCGCCGCG CCATCGCGGG CCTTTACGCG
CGCTGGTACG GGGTGGACCT GGACCCGGCG CGGGTTGTGG TGACCTCGGG CTCCTCGGCG
GCGTTTCTTC TTGCCTTCAC CACCTATTTC GATGCCGGCG CCCGGGTCGG GGTGGCCGAG
CCCGGCTACC CGTCCTACCG GCAGATCCTC AAGGCGCTGT CGCTGGCCCC CGTGGGTCTG
CCCACCCAAC CCGAGACCGG GCACCGCATG ACCGCCGAAG CGTTGGCGCA GGCCGATATC
GCGGGCGCGA TCATCGCTTC GCCGAACAAC CCCACGGGCA CCATGCTGGA CCGCGACGGG
TTGGGCGCGC TCATTGCCGC CTGCCGCGAC CGGGACCGGG TGTTCATCTC CGACGAGATC
TACCACGGGC TGCATTACGG CGACCGGGCG GTCTCGGCGC TGGAGATTTC CGACGATGTC
TGCGTGATCA ACTCGTTTTC CAAGTATTTC TCCATGACCG GCTGGCGCAT CGGCTGGTTG
GTCGTGCCCG AGGCGCAGGT CCGCGTGGTC GAAAGGCTGG CCCAGAACAT GTTCATCTGC
GCCCCTCATG TGGCCCAGAT CGCCGCCCTG GGTGCGCTCG GCGACGCCGC CCGGCCGGAG
CTGGAGGCCA ACCGCGCCGT CTATGCCGCC AACCGGCAGC TGGTCATCGA CGGGCTGCGG
GCCGCGGGGC TCGATGCCTT CGCGCCGCCG GACGGGGCGT TCTACGTCTA TGTGGATACC
GGCGCGCTCT CGTCCGACAG CCGGACCCTG GCGGCCGATA TTCTCGAAAA GGCCGGGGTG
GCGGTCACAC CGGGACTCGA TTTCGATCCG GTGCGCGGCC ATGGGACCCT GCGGCTGTCC
TATGCGCGGG CGACCGAGGA TATCGCCGAG GGCATGACCC GGCTCACGAA TTATTTTGCC
GCGGCAGGCC CCAACCCGCT TTTGACTGGT TCCTGA
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| Protein sequence | MQNSSRSEVD PFIVMDVMEA ARRAEAAGRH IIHMEVGQPG TAAPLPARRA VAAQLDQDAM
GYTVALGLPE LRRAIAGLYA RWYGVDLDPA RVVVTSGSSA AFLLAFTTYF DAGARVGVAE
PGYPSYRQIL KALSLAPVGL PTQPETGHRM TAEALAQADI AGAIIASPNN PTGTMLDRDG
LGALIAACRD RDRVFISDEI YHGLHYGDRA VSALEISDDV CVINSFSKYF SMTGWRIGWL
VVPEAQVRVV ERLAQNMFIC APHVAQIAAL GALGDAARPE LEANRAVYAA NRQLVIDGLR
AAGLDAFAPP DGAFYVYVDT GALSSDSRTL AADILEKAGV AVTPGLDFDP VRGHGTLRLS
YARATEDIAE GMTRLTNYFA AAGPNPLLTG S
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