Gene Dshi_1157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1157 
Symbol 
ID5711925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1182730 
End bp1184175 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content70% 
IMG OID641267068 
Productprotein of unknown function UPF0061 
Protein accessionYP_001532500 
Protein GI159043706 
COG category[S] Function unknown 
COG ID[COG0397] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.240564 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGC ACATCCCCTT CGAGGCGCGC TATGCCGCCC TTCCCGACCG GTTCCACGCG 
CAACTCGCCC CCACGCCGGT CTCCGCGCCC GGCCTGATCA AGGTCAATCA CCGCCTCGCG
CGCGAGCTGG GGCTCGACCC CGCAGCCCTC GAAAGCCCCG AAGGGGTCGC AATGCTGGCG
GGCAACGCCG TGCCCGAGGG CGCCGTGCCC ATTGCCCAGG CCTATGCCGG GCACCAGTTC
GGCGGCTGGA ACCCGCAGCT GGGCGACGGG CGCGCGATCC TGCTGGGCGA GTTGCGCCAT
GCGGACGGGG CCTTGCGCGA CGTGCAACTC AAGGGCTCCG GCCCGACGCC GTTCTCGCGC
ATGGGCGACG GGCGCGCGGG GCTCGGCCCG GTGCTGCGCG AATACATCCT GTCGGAGGCC
ATGCATGCGC TGGGGGTGCC CACCACCCGC GCCCTGGCCG CCGTGACCAC GGGCGAGCGG
GTGCTGCGCG AACAAGTGCT GCCCGGTGCG GTCTTCACCC GCGTGGCGTC CAGCCACCTG
CGGGTCGGCA CCTTCCAGTT CTTCGCCGCC CGCGACGACC TGGACGCGCT CGAAACCCTG
TGCGATTTCG CCCGCGCGCG CCATGACCCG GAGGCAGAAA CCGCCCTCGA CCTGCTGCGC
GGCGTCATCG CGCGGCAAGC CGATCTGATC GCGCGCTGGA TGGGCCTGGG CTTCATCCAC
GGGGTGATGA ACACCGACAA CATGACGATC TCGGGCGAGA CCATCGATTA CGGCCCCTGC
GCCTTCATGG AAGCCTACCA TCCCGACACG GTCTATTCCT CCATCGACCG GCACGGGCGC
TATGCCTACC GAAACCAGCC GGAGATCGCG GTCTGGAACC TGGCGCAACT CGCCACCGCC
CTGCTGCCGC TGATCGACGC GGACCAGGAC CGCGCGATCG AGGTGGCGAC CGAGGCGGTG
CACGGGTTTG CCGATCTTTA CCAATCGGCC TGGCTCGACG TGTTCCGGGC CAAGCTGGGC
CTCGCCACCG CGCGGGAGGA GGATGCGAAA CTGGCCCACG GCCTGCTGCG CCTGATGGCC
GAGGCAGGGG TCGATTTCAC CCTCGCCTTC CGCGGCCTGG CCGAGGGGCA AGAGGTCGCG
CGCAAGCTCT ATGCCCAGCC CGAGATCTTC GATGCCTGGG CGCGGGACTG GCGCGCGCGT
CTGGCCGAGG AAGGGGTCGA TGCGGAGACG CTGACCGCCC GGCTCACATC CGCCAACCCG
GCCTTCATCC CCCGCAACCA CCGGGTCGAA CAGGCGATCC AGGCCGGCAT GGCGGGTGAC
TTCGCACCGT TCCACACCCT GGTCGCCGTG CTGGAGCGTC CCTTCGACGA CCAGCCGGAG
CATGCGGCCT ACATGGCCCC GGCCCGGCCC GAAGAAGCGG TCCGCGAAAC CTTCTGCGGC
ACCTGA
 
Protein sequence
MSLHIPFEAR YAALPDRFHA QLAPTPVSAP GLIKVNHRLA RELGLDPAAL ESPEGVAMLA 
GNAVPEGAVP IAQAYAGHQF GGWNPQLGDG RAILLGELRH ADGALRDVQL KGSGPTPFSR
MGDGRAGLGP VLREYILSEA MHALGVPTTR ALAAVTTGER VLREQVLPGA VFTRVASSHL
RVGTFQFFAA RDDLDALETL CDFARARHDP EAETALDLLR GVIARQADLI ARWMGLGFIH
GVMNTDNMTI SGETIDYGPC AFMEAYHPDT VYSSIDRHGR YAYRNQPEIA VWNLAQLATA
LLPLIDADQD RAIEVATEAV HGFADLYQSA WLDVFRAKLG LATAREEDAK LAHGLLRLMA
EAGVDFTLAF RGLAEGQEVA RKLYAQPEIF DAWARDWRAR LAEEGVDAET LTARLTSANP
AFIPRNHRVE QAIQAGMAGD FAPFHTLVAV LERPFDDQPE HAAYMAPARP EEAVRETFCG
T