| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1155 |
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| Symbol | |
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| ID | 5711923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1180655 |
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| End bp | 1182040 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641267066 |
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| Product | uroporphyrin-III C-methyltransferase |
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| Protein accession | YP_001532498 |
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| Protein GI | 159043704 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0007] Uroporphyrinogen-III methylase
[COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) |
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| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase
[TIGR01470] siroheme synthase, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCATT TTCCCATCTT CCTCGCGGTC TCGGGCCGAC GGATCGTCCT GGGCGGCGGC
GGCGACGCCG CGCTGGCCAA GCTGCGGCTT TTGCTGAAGA CCCAGGCGCG GCTGACGGTG
ATCGCACCCG ACCCGGCCCC GGAAATCCGC GATTGGGCCG CCGAGGGGCG CCTGCGCCTG
ATCCCCCGCG CCTTCGAGCC CGGCGACGGG ATGTGCGCCA GCCTGGTCTA TGCCGCAACC
GAGGACGCGG CCGAGGATGC GCGCATCCGC CGCCTCGCCC AGGCCGACGG CGCGCTGGTG
AACATCGTCG ACAACCTCGC CGACAGCCAG TTCATCACCC CCGCCATCGT CGACCGCGAC
CCGGTGACCA TCGCCATCGG CACCGAGGGC GCCGCCCCCG TGCTGGCCCG CGCGATCAAG
GCCGATCTGG AGGCGAAGCT CTCGCCGCTT CTGGGCCTTC TGGCAAAGGT CGGCAAGGGC
TTCCGCGCCC GTGCCGAGGC CCTGCCCATG GGCCGCGCGC GCCGGGATTT CTGGCGCGAC
TACTATTTCC GCACCGGCCC GTCCGCCGCC GACCAGGGCG GGCAGGAGGG GGCCGAGGCC
GCCCTCGACA CCCTGCTCGC CAGCCATCTT GCCCGCAAGG CCCGGACCGG GTCCGTGGCG
CTGGTGGGGG CCGGCCCGGG CGACCCGGAG CTTCTGACCC TCAAGGCGCG CAAGGCGCTC
GACGAGGCCG ATGTGGTGAT CCACGACCGG CTGGTCCCCC CCGCGATCCT GGAGCTTGCC
CGCCGCGAGG CCACGCTGAT CTATGCGGGC AAGGAGGGCT TCGGCACCTC CACCTCGCAG
GAGGCCATCA ACGATCTGAT CGTCACCCAT GCCCGCGCGG GCGCGCAGGT GGTGCGCCTG
AAATCCGGCG ATCCCGCGGT CTACGGGCGG CTCGACGAAG AGATCGACGC GCTGGAGGAC
GCGGGCATTC CCTGGCGCAT CGTGCCGGGG CTGACCACCG CCTCCGTCGC CGCCGCGACC
CTTGGCCAGA GCCTGACCCG GCGCGGTCGC AACGCCGCCC TGCGCTTCCT GACCGGTCAC
GACACCAAGG GGTTCGCCGA CCATGACTGG CGCGGGCTCG CCCGGCCGGG CCAGGTTGCC
GCGATCTACA TGGGCAAGCG CGCGGCCCGG TTCCTGCAGG GGCGTCTGCT GATGCACGGG
GCCGCGCCCG CCACCCCCGT AACCCTGATC GAGAATGTCA GCCGCCCCGA CCAGCGCGTC
GTCGCCACCG ATCTGGCAGG CCTCGCCGAC GCCGCCCGGA CCCTCACCGG CCCCGCCATC
CTGATGTACG GCCTCGCCCC CCGCGACGCC CGCTCCGCCC TGACCGACCT GAAGGAATTT
GCCTGA
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| Protein sequence | MQHFPIFLAV SGRRIVLGGG GDAALAKLRL LLKTQARLTV IAPDPAPEIR DWAAEGRLRL
IPRAFEPGDG MCASLVYAAT EDAAEDARIR RLAQADGALV NIVDNLADSQ FITPAIVDRD
PVTIAIGTEG AAPVLARAIK ADLEAKLSPL LGLLAKVGKG FRARAEALPM GRARRDFWRD
YYFRTGPSAA DQGGQEGAEA ALDTLLASHL ARKARTGSVA LVGAGPGDPE LLTLKARKAL
DEADVVIHDR LVPPAILELA RREATLIYAG KEGFGTSTSQ EAINDLIVTH ARAGAQVVRL
KSGDPAVYGR LDEEIDALED AGIPWRIVPG LTTASVAAAT LGQSLTRRGR NAALRFLTGH
DTKGFADHDW RGLARPGQVA AIYMGKRAAR FLQGRLLMHG AAPATPVTLI ENVSRPDQRV
VATDLAGLAD AARTLTGPAI LMYGLAPRDA RSALTDLKEF A
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