Gene Dshi_1148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1148 
Symbol 
ID5711116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1175081 
End bp1175665 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content67% 
IMG OID641267059 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001532491 
Protein GI159043697 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCTAC GCCGGCCCGC ACTCCGGATC GAGACGGAGC GCATGACGCT GCGCCCGCCG 
TCCCACGCGG ATTTCCGATC CTGGACCGCC CTGCGCGCGA CCAGCCGCGC ATTCCTGACC
CCGTGGGAGC CGACCTGGTC GCCCGATCAC CTGAGCCGCA AGTCCTTCAC CAACCGGGTC
TACTGGGCCA ATCGGTCGAT CAAGGGCGAG ACCGCCTATC CGCTCTTTTT GTTCGAACGC
GGCAGCCAAG ACCTGCTGGG GGCGATCACG CTCGACAATG TCAAGCGCGG CCCGGCCCAG
TCGGCCACCC TGGGCTACTG GATCGGTGCG CCCTATGCCC GGCAGGGGTT CATGCGCGAG
GCGATCACCG CGCTTACCCA TTACGCCCAT ACGGAGATGG ATCTCAGCCG CATCGAGGCC
GCCTGCCTGC CGGAGAACAC GGCCTCTCGC GGCGCGTTGG AGAAATGCGG GTTCAAGTAC
GAGGGTGTCG CGCAGAGCTA CCTGCAGATC GCCGGGCGCT GGCGCAACCA TGTGCTCTAC
GCCAATTTGC GCGGTGACCG CCGGGGCCGC ACCGACGTGC GCTGA
 
Protein sequence
MLLRRPALRI ETERMTLRPP SHADFRSWTA LRATSRAFLT PWEPTWSPDH LSRKSFTNRV 
YWANRSIKGE TAYPLFLFER GSQDLLGAIT LDNVKRGPAQ SATLGYWIGA PYARQGFMRE
AITALTHYAH TEMDLSRIEA ACLPENTASR GALEKCGFKY EGVAQSYLQI AGRWRNHVLY
ANLRGDRRGR TDVR