| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1140 |
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| Symbol | ctaC |
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| ID | 5711108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1168156 |
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| End bp | 1168968 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641267051 |
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| Product | cytochrome c oxidase subunit II |
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| Protein accession | YP_001532483 |
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| Protein GI | 159043689 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 |
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| TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCTC TTGGCGCGCC GGCATTTGCA GACAATCGCG AAGGCATGGA GATCATCGGC
CAACCCATTC CGGGCGGCAT CGGGTTCCAG CCCGCGGCGA CCGAACTGGC GCGGGAACTG
CAATGGCTCG ACGGGCTGCT GCTGGTCATC ATCACCGCGA TCGTGCTGTT CGTGACGGCC
CTGATCGCCT GGACGATCGT CCGCCACAAC GCGAAGTCCA ATCCGGAGCC GGCCCGGTTC
AGCCATAACA CCCCGATCGA GATCACCTGG ACCGTGGTGC CGATCCTGAT CTTGGTGTTC
ATCGGCGCCT TCTCCCTGCC CGTGCTCTTC AAGCAGCAGG AAATCCCCGA GGCGGAAGTG
ACCATCAAGG CGACGGGCTA CCAGTGGTTC TGGGGCTACG AGTATCCCGA GCATGATTTC
GGCTTCGAAT CCTTCATGCT GGCGCGCGAC GAACTGGCCG AGCACGGCTA CGAGGACGAG
CATTTCCTGC TGGCCACCGA TACCGCGATG GTCGTGCCCG TGGACACCAC CGTGGTGGTG
CAGGTGACCG CAGCGGACGT GATCCACTCC TGGACCATCC CGGCCTTCGG CGTGAAGCAG
GACGGCATCC CCGGGCGTCT GGCGGAACTG TGGTTCTCGG CCGAGAAGGA AGGCATCTAT
TTCGGCCAGT GCTCGGAACT TTGCGGCAAG GATCACGCTT ATATGCCCAT TACCGTCAAG
GTGGTGAGCA AGGAAGAATA TGCGCGCTGG CTCGACACCG CGATCGCGCA GTACAACGGC
ACCCCGCGTA CCGTGGACTA CGCCGCCAAG TGA
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| Protein sequence | MAALGAPAFA DNREGMEIIG QPIPGGIGFQ PAATELAREL QWLDGLLLVI ITAIVLFVTA
LIAWTIVRHN AKSNPEPARF SHNTPIEITW TVVPILILVF IGAFSLPVLF KQQEIPEAEV
TIKATGYQWF WGYEYPEHDF GFESFMLARD ELAEHGYEDE HFLLATDTAM VVPVDTTVVV
QVTAADVIHS WTIPAFGVKQ DGIPGRLAEL WFSAEKEGIY FGQCSELCGK DHAYMPITVK
VVSKEEYARW LDTAIAQYNG TPRTVDYAAK
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