| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1139 |
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| Symbol | tldD |
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| ID | 5711107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1166474 |
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| End bp | 1167895 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641267050 |
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| Product | peptidase U62 modulator of DNA gyrase |
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| Protein accession | YP_001532482 |
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| Protein GI | 159043688 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGACG CTGCGTTCCG CCCTTTCGAG ACTTCGCTGG ATCCCGACGT GGCGCTTCGC
GTGCTGCGCG AGGCGGTTGC CGGGGCCGAT GACGGGGAGC TTTTCCTCGA ACGGCGGCGG
TCGGAGTCGC TCCTGCTGGA TGACGGGCGG ATCAAGACGG CGAATTACGA CGCATCCGAG
GGGTTCGGGC TGCGTGCGGT GCGTGGCGAA ACGGCGGGCT ATGCCCATTC CACCGAACTG
TCCGAGGCGG CCTTGCGGCG TGCGGCGACG ACCGCGCGGC TGGCGGTGGG CGACGGCGGC
GGGGTGCTGG CCGAGGCGCC GGGGGCCACG AACCGGCGTC TTTATTCGGA TGAAAACCCT
ATGGATGCCG CCGCCTTCGG CGTGAAGATC GAAACCCTGC GCGAGATCGA TGCCTATGTC
CGGGCGCTCG ACCCGCGCGT GGTGCAGGTC TCGGCCTCCC TGGCCGCGTC GATCCAGGAG
GTCGAGATCC TGCGCCCCGA GGGCCACCGG GTGCGCGACG TGCGCCCGAT GACCCGGCTC
AACGTGTCGA TCATCGTCGA ACAGGACGGC CGTCGCGAGA GTGGCTCGGC TGGGGGTGGC
GGGCGCTATG GGCTGGCGAG CCTGATGGGC GCGGAGCATT GGCAGGGCGT GGCGCGGGAG
GCGTTGCGGG TCGCGGTCGT TAACCTCGAT GCGGAGCCTG CGCCCGCGGG GGTGATGGAT
GTGGTGCTTG GCCCCGGCTG GCCCGGTATC CTGTTGCACG AGGCGGTGGG GCATGGGCTC
GAGGGCGATT TCAACCGCAA GAAATCCTCG GCCTTCGCCG GGCTGATGGG CCAGCGGGTG
GCCGCCCCCG GGGTGACCGT GCTCGACGAC GGTACGATCC CGGACCGGCG CGGATCGCTC
ACGGTCGACG ACGAGGGCAC GCCCTCGCAC AAGACGACGC TGATCGAGGA CGGCATCCTC
GTGGGGTTCA TGCAGGATCG CCAGAACGCG CGCCTGATGG GGGTGGAGGC CACGGGCAAC
GGTCGGCGGG AAAGCTACGC GCATATCCCC ATGCCGCGGA TGACCAACAC CTATATGCTG
GGCGGGGATG CCGCGCCGAG GGAGATCGTG GCGGACCTGA AGGACGGGAT CTACGCGGTC
GGGTTCGGCG GCGGACAGGT GGATATCACC AACGGCAAGT TCGTCTTCTC CTGCACCGAG
GCCTACCGGG TGAAGAACGG CAAGGTGGGC GCTCCGGTAA AGGGGGCGAC GCTGATCGGC
GACGGGCCCA CTGCGATGCA GCAGATCCGC GCCATCGGCA ACGACATGGC GCTCGATCCC
GGGATGGGCA ATTGCGGCAA GGCGGGCCAG TGGGTGCCGG TGGGCGTGGG CCAGCCGACC
CTGATGATCG GGGGGCTGAC CGTGGGCGGA TCGGCGGCGT GA
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| Protein sequence | MTDAAFRPFE TSLDPDVALR VLREAVAGAD DGELFLERRR SESLLLDDGR IKTANYDASE
GFGLRAVRGE TAGYAHSTEL SEAALRRAAT TARLAVGDGG GVLAEAPGAT NRRLYSDENP
MDAAAFGVKI ETLREIDAYV RALDPRVVQV SASLAASIQE VEILRPEGHR VRDVRPMTRL
NVSIIVEQDG RRESGSAGGG GRYGLASLMG AEHWQGVARE ALRVAVVNLD AEPAPAGVMD
VVLGPGWPGI LLHEAVGHGL EGDFNRKKSS AFAGLMGQRV AAPGVTVLDD GTIPDRRGSL
TVDDEGTPSH KTTLIEDGIL VGFMQDRQNA RLMGVEATGN GRRESYAHIP MPRMTNTYML
GGDAAPREIV ADLKDGIYAV GFGGGQVDIT NGKFVFSCTE AYRVKNGKVG APVKGATLIG
DGPTAMQQIR AIGNDMALDP GMGNCGKAGQ WVPVGVGQPT LMIGGLTVGG SAA
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