| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1136 |
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| Symbol | |
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| ID | 5711104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1161319 |
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| End bp | 1162014 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641267047 |
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| Product | 3-oxoacid CoA-transferase, A subunit |
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| Protein accession | YP_001532479 |
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| Protein GI | 159043685 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.276358 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAAAA TCTATGGCTC GGCCGCCGAG GCGCTTGAGG GGCTCTTGTT CGATGACATG
CTGATCGCGG CGGGAGGGTT CGGCCTGTGT GGCATTCCCG AGCTGCTGAT CGAAGCGGTC
CAGAAAAGCG GCGTCAAGCG TCTGACCATC GCCAGCAACA ACGCTGGGGT GGATGATTTC
GGCCTCGGGC TCCTGCTGCA GACCAAGCAG GTCAAGAAGA TGATGTCGTC TTATGTCGGC
GAGAACGACC TGTTCATGCA GCAGTACCTG TCGGGCGAGT TGGAGATCGA GTTCAACCCC
CAGGGCACCC TGGCCGAGCG GATGCGCGCG GGTGGTTGCG GGATTCCGGG CTTCTACACA
AAGACCGGCG TGGGCACCGT GATTGCCGAG GGCAAGGAGC ACAAGGACTT CAACGGCGAG
ACCTATATCC TCGAAGAAGG GATCTTCGCC GACCTGTCCA TTGTGAAGGC CTGGAAGGCG
GACGAGACCG GCAACCTCGT GTTCCGCAAG ACCGCTCGGA ATTTCAACCC GCCCGCCGCG
ATGTGTGGCA AGGTCTGCGT CGCCGAGGTG GAGGAGATCG TTCCGACCGG CACACTGGAC
CCGGATACCA TCCATCTGCC CGGCATCTAT GTGCACCGCC TCGTCCAGGG GGAGCACGAA
AAACGGATCG AGCAGCGGAC GACACGCGCC GCCTGA
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| Protein sequence | MQKIYGSAAE ALEGLLFDDM LIAAGGFGLC GIPELLIEAV QKSGVKRLTI ASNNAGVDDF
GLGLLLQTKQ VKKMMSSYVG ENDLFMQQYL SGELEIEFNP QGTLAERMRA GGCGIPGFYT
KTGVGTVIAE GKEHKDFNGE TYILEEGIFA DLSIVKAWKA DETGNLVFRK TARNFNPPAA
MCGKVCVAEV EEIVPTGTLD PDTIHLPGIY VHRLVQGEHE KRIEQRTTRA A
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