| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1127 |
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| Symbol | |
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| ID | 5711095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1152923 |
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| End bp | 1154230 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641267038 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_001532470 |
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| Protein GI | 159043676 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4963] Flp pilus assembly protein, ATPase CpaE |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCAG TGGCCCCTCT GAGCGGCAAG AACACGGATG AAACCCAAGG GGTGGAGATC
CCTACAGACG AGGCGCCAAT CCTCGCCTGC ACCGTTTCGC GTGACGTTCA GAATTTCGAG
ATCCTGATCG ACGAGATGGA GGCACGCTTC CAGGACGCTT GGGGCGATTT GCGGATCTCC
GAAGCATTGG ATTTTCTCGA CCAGCCCGAT GCTGCGCGGG TGCAGGTCCT GGCCCTCGCC
CTGGACCTCG AGGACGAGAG CAATGTCGAC ACGGTGCTCG ATATCGTGCG CAAGGCGACG
GAGCTGTCGA TTTCGGTCCT GCTCATCGCG GATGAGCTTG ACCCCATTGT TCTGCACCAG
GTGTTGCAGG CCGGGGCACG AGAATTCCTG CCCTACCCGA TCCCCGAGCA AGGGCTGACC
GAAGCGGTGG AGCGGCTGTC GCGGGCTGCA AGGCCGCCGA TCCCGTTGGC CGATGCGGTC
AATGTCGCGG AGATCCCGGC GACCGAGGCC ACCTTGCCGA CGCGGACCGC AGGGGGATGT
ACGATATTTG CAGTGCAGGG GCTGGCGGGC GGCGTTGGGG CCACCACCTT TGCGGTCAAT
CTCGCGTGGG AGTTGGCAAC GCTGAAAGGC ACGACACCGC GCGTTGGCCT GATGGACATG
GACCAGCAGT TCGGATCGGT TGCAACCTAT CTGGATCTAC CGCGCAAGGA TCTGATCTTC
GAGCTGATGA GCGACGTGGA CAGCCTCGAC GATGATGCGT TCCGACAGGC CTTGCAGATC
GTCGACGGCA AACTGAGCGT CTTCACCTCC CCCGCCGAGA TCCTGCCTCT GGACCTTCTG
CCCCCCGAAG ACATGGACAA GCTGATCTCC ACCGCTGCGG GCATGTTCGA TTATCTCGTG
ATCGACATGC CCAGCGCACT GGTGAACTGG ACCGAGACGG CCCTGCGCAT GGCGGACGTG
TTTTTTCCTG TGATCGAGCT CGACTTGCGC TCGGCCCAGA ATGCCCTGCG CTTCGTCAAG
ACTCTGAAAT TCGAAGATCT TCCCGTGGAA AAGCTGCGTT TCGTGCTGAA CCGGGCCCCC
AAGATGACCG ATCTGGCGGG CAAGGCCCGG GTCAAGCGGA TGGCCGAAAG CCTCGATATC
TCCTTCGGAG AGAAACTGCC TGACGGGGGA AAGGCGGTCG CCGAGTCCAA CGATCATGGA
TCACCCCTCG CCTTGCGTGC GAGGAAAAAC CCGCTTCGGA AGGAAATCGC GAAGCTCGCA
CAATCCCTCC ACGACGTCAG CACTGGTGCC GAGGCCGCCA ATGGCTGA
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| Protein sequence | MTAVAPLSGK NTDETQGVEI PTDEAPILAC TVSRDVQNFE ILIDEMEARF QDAWGDLRIS
EALDFLDQPD AARVQVLALA LDLEDESNVD TVLDIVRKAT ELSISVLLIA DELDPIVLHQ
VLQAGAREFL PYPIPEQGLT EAVERLSRAA RPPIPLADAV NVAEIPATEA TLPTRTAGGC
TIFAVQGLAG GVGATTFAVN LAWELATLKG TTPRVGLMDM DQQFGSVATY LDLPRKDLIF
ELMSDVDSLD DDAFRQALQI VDGKLSVFTS PAEILPLDLL PPEDMDKLIS TAAGMFDYLV
IDMPSALVNW TETALRMADV FFPVIELDLR SAQNALRFVK TLKFEDLPVE KLRFVLNRAP
KMTDLAGKAR VKRMAESLDI SFGEKLPDGG KAVAESNDHG SPLALRARKN PLRKEIAKLA
QSLHDVSTGA EAANG
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