| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1109 |
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| Symbol | tolR |
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| ID | 5711077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1134195 |
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| End bp | 1134599 |
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| Gene Length | 405 bp |
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| Protein Length | 134 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641267020 |
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| Product | biopolymer transport TolR |
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| Protein accession | YP_001532452 |
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| Protein GI | 159043658 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | [TIGR02801] TolR protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00176605 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.311844 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCGAGA TCAACGTCAC CCCCTTCGTG GATGTGATGC TGGTGCTCCT GATCATCTTC
ATGGTGGCCG CACCCCTGCT GACCGTGGGT GTGCCTGTCG ATCTGCCCGA GACCAACGCC
CAGGCCCTGC CGGGCAGCGA GGAGGAGCCC CTGACAGTCA CCGTGGCCGC CGATGGCCGC
GTGCTGATCC AGACCACGGA AGTGCCGCGC GATACGCTGA TCCCGCGCCT GCGCGCCATC
GCGGCGGAGC GGGAGGGCGA CCGGCTGTTC CTCCGGGCTG ATAGCGGGAT TTCCTATGGC
GAGGTGATGC AGGTCATGGG CGCGCTCAAT GCCGCCGGGT TCAACAATAT CGGGCTTGTG
ACCGAAACCG GCGGCCCCGA TTTCGACGGT GGGAGCGAGG GCTAG
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| Protein sequence | MSEINVTPFV DVMLVLLIIF MVAAPLLTVG VPVDLPETNA QALPGSEEEP LTVTVAADGR
VLIQTTEVPR DTLIPRLRAI AAEREGDRLF LRADSGISYG EVMQVMGALN AAGFNNIGLV
TETGGPDFDG GSEG
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