Gene Dshi_1103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1103 
SymbolruvC 
ID5711071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1129962 
End bp1130492 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content67% 
IMG OID641267014 
ProductHolliday junction resolvase 
Protein accessionYP_001532446 
Protein GI159043652 
COG category[L] Replication, recombination and repair 
COG ID[COG0817] Holliday junction resolvasome, endonuclease subunit 
TIGRFAM ID[TIGR00228] crossover junction endodeoxyribonuclease RuvC 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.788041 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.52984 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGTTC TGGGCATCGA TCCGGGCCTG CGAAACCTCG GCTGGGGCGT GATCTCGGTC 
CAGGGGAGCA GGTTGCGGCA TGTGGCCAAC GGTCAGATCC GCTCGGAGGG CAGTGAGCTC
GCGCAGCGCC TTCTCAGCCT CTATCGCCAG TTGACCGAGG TCGTGGCGGG CCATGCGCCG
GATGCGGCGG CGGTGGAACA TACCTTTGTC AACAAGGACG CCACGGGCAC CCTGAAGCTC
GGGCAGGCCC GGGGCATCGC CCTGCTGGTG CCTGCGGCGG CCGGGCTGGA AGTGGCGGAA
TATGCCCCCA ACCACGTGAA GAAATCCGTG GTCGGTGTCG GCCATGCCGC CAAGGAGCAG
GTGCAGCACA TGGTCAAGCT GCAACTGCCC GGGGTCGTTC TGGCCGGGGC GGATGCGGCG
GATGCCCTGG CGATCGCGAT CTGCCATGCC CATCACCTGC AGTCCCGGGG CAAGGTGGTT
GCCGTCAACC GGACGGTGGC CGCGCCCGAT GGATTGCGGA GCGTGTCATG A
 
Protein sequence
MRVLGIDPGL RNLGWGVISV QGSRLRHVAN GQIRSEGSEL AQRLLSLYRQ LTEVVAGHAP 
DAAAVEHTFV NKDATGTLKL GQARGIALLV PAAAGLEVAE YAPNHVKKSV VGVGHAAKEQ
VQHMVKLQLP GVVLAGADAA DALAIAICHA HHLQSRGKVV AVNRTVAAPD GLRSVS