Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1103 |
Symbol | ruvC |
ID | 5711071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 1129962 |
End bp | 1130492 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641267014 |
Product | Holliday junction resolvase |
Protein accession | YP_001532446 |
Protein GI | 159043652 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0817] Holliday junction resolvasome, endonuclease subunit |
TIGRFAM ID | [TIGR00228] crossover junction endodeoxyribonuclease RuvC |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.788041 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.52984 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGTTC TGGGCATCGA TCCGGGCCTG CGAAACCTCG GCTGGGGCGT GATCTCGGTC CAGGGGAGCA GGTTGCGGCA TGTGGCCAAC GGTCAGATCC GCTCGGAGGG CAGTGAGCTC GCGCAGCGCC TTCTCAGCCT CTATCGCCAG TTGACCGAGG TCGTGGCGGG CCATGCGCCG GATGCGGCGG CGGTGGAACA TACCTTTGTC AACAAGGACG CCACGGGCAC CCTGAAGCTC GGGCAGGCCC GGGGCATCGC CCTGCTGGTG CCTGCGGCGG CCGGGCTGGA AGTGGCGGAA TATGCCCCCA ACCACGTGAA GAAATCCGTG GTCGGTGTCG GCCATGCCGC CAAGGAGCAG GTGCAGCACA TGGTCAAGCT GCAACTGCCC GGGGTCGTTC TGGCCGGGGC GGATGCGGCG GATGCCCTGG CGATCGCGAT CTGCCATGCC CATCACCTGC AGTCCCGGGG CAAGGTGGTT GCCGTCAACC GGACGGTGGC CGCGCCCGAT GGATTGCGGA GCGTGTCATG A
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Protein sequence | MRVLGIDPGL RNLGWGVISV QGSRLRHVAN GQIRSEGSEL AQRLLSLYRQ LTEVVAGHAP DAAAVEHTFV NKDATGTLKL GQARGIALLV PAAAGLEVAE YAPNHVKKSV VGVGHAAKEQ VQHMVKLQLP GVVLAGADAA DALAIAICHA HHLQSRGKVV AVNRTVAAPD GLRSVS
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